| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1397 |
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| Symbol | |
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| ID | 8132336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1633013 |
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| End bp | 1633879 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864687 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003016979 |
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| Protein GI | 253687789 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.439861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAC AGCCCCCCGT GCGGCCCGAG TATCAGCGTG AACTGGCACC GCTGAAAGAC
TTCACACTGA CCCAGCCTCT GCCGCTGACC ACGCGCCTGT GGAATCAAAC CTGGATTCGC
AAGCTGGTGC TGTTGGCAGG GCTGCTATTG CTGTGGGAGT TCGCCGCACG CTGGCAAAAC
AACGATCTGA TGTTGCCAGG TTTCCTGCAA ACCTTTCAGG CATTTCGTGA CGATCTCGCC
AGCGGCGAAC TGCCGCATAA GATGGTGGTT TCCCTCGGCA CATTGCTAAA AGGCTATGTC
ATTGGCAGCC TGCTGGCACT GGCCCTCAGC GCGTTGGCGG TATCCACCCG TTTCGGACGC
GATCTCTTAG GTACCCTAAC CTCCATGTTC AACCCGCTCC CTGCGATTGC GTTACTGCCG
TTAGCGCTGC TGTGGTTTGG ACTGGGAGAA AAGAGTCTGG TCTTCGTTCT CGTCCACTCC
GTGATGTGGC CGATGGCGCT GAATACCTAT TCCGGCTTTC TCGGCGTTTC GGAAACGCTG
CGTATGGCGG GTCGCAACTA CGGCCTGACA GGCTTTCGCT ATATCAATGC CATCCTGATC
CCCGCTGCGC TGCCGTCGAT TCTCTCCGGT CTGAAGATCG GCTGGGCATT TGCCTGGCGT
ACCCTGATCG CCGCTGAACT GGTCTTCGGC GCATCCAGCG GCAATGGCGG TTTGGGCTGG
TACATCTTCC AGAACCGTAA TGAGCTTTAT ACCGACCGCG TTTTCGCCGG GCTGGCGTCC
GTCATCATCA TCGGGCTGCT GGTTGAAGGG CTGGTGTTTT CCACCATCGA AAAGGTCACG
GTGAAACGCT GGGGAATGCA GCGCTAA
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| Protein sequence | MSIQPPVRPE YQRELAPLKD FTLTQPLPLT TRLWNQTWIR KLVLLAGLLL LWEFAARWQN
NDLMLPGFLQ TFQAFRDDLA SGELPHKMVV SLGTLLKGYV IGSLLALALS ALAVSTRFGR
DLLGTLTSMF NPLPAIALLP LALLWFGLGE KSLVFVLVHS VMWPMALNTY SGFLGVSETL
RMAGRNYGLT GFRYINAILI PAALPSILSG LKIGWAFAWR TLIAAELVFG ASSGNGGLGW
YIFQNRNELY TDRVFAGLAS VIIIGLLVEG LVFSTIEKVT VKRWGMQR
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