| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1388 |
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| Symbol | |
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| ID | 8132327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1623028 |
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| End bp | 1624317 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864678 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016970 |
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| Protein GI | 253687780 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTGGC GACTGTTACG TCAGTCCTGG CGCAGAAATA TTCGGCGTAA ATCGCTGGCG
GTGCTGACCG TATTTTTGGC GGCGGGGTTG ATCTCCGCGC TGCTGGCGGT ATCCATCGAC
ATCGGCGACA AAATGGCTCG CGAACTGAAG TCCTACGGCG CGAATATTCT GATTGAGCCC
GCGGGGCAAG CAGCGCTGCC TGCGTTGTTT GGCGAACGCA GTAATCCGCT GGAAGGGCAA
GACTTCCTCG ACGAAGCCGA GTTGCCGAAT ATCAAAGATA TCTTCTGGCG CAATAACATT
GTCGGTTTTG CGCCGCTGTT GAGCGGTGAT GTTGAGATCA ACGGACAGCC GGTTGCGGTG
CTGGGCACCT TCTTTTCTCA GCCTGTCGCC GTGCCGGACG AAGAGGACTA CCGCACGGGA
CAAATGACCG TTAGCCCTTA CTGGCAGGTG ACAGGACAGT GGCCGCAGGA ACCGGTGACG
GTGGAAAATG TGGCGCAGAC GCTGGTGGGA AAACAGCTGG CGGCGCAAAC GGGCTGGAAA
GTCGGGGATA AACTCGCGCT GCACGGCGCA AAAGGGGACG CAACGGTAGA AGTGAGCGGC
ATACTGAGCA GCGGGGGTGA TGAAGAAACT CGTTTGGTCA TGCCGCTGGC AACGGTGCAA
TCGCTGCTGG GGCTGGCCGG TAAAATTCAG GCGATTCGTG TGTCGGCGCT AACCGTGCCG
GAAAACGAAC TGTCGCGGCG GGCGCGGGAA AATCTGGAAG CACTGAATGC CGAAGAATAT
GACCTCTGGT ACTGCACCGC GTATGTCTCT TCGATTGCGC ACCAGTTGGA AGAAGCTATT
TCTGGCTCGG TGGTGCGCCC CATCTGGCAG GTAGCCGCCT CGGAAGGCGT GGTGATCGAC
AAGATCCAAC TGCTTCTGGC GGTGGTGACC TTCGCGGCAC TGGTCGCTTC TGCAATGGGA
ATTGCCTCGC TGATGACCAG CACGATTATG GAACGTGCCA AAGAGATTGG GCTGATGAAA
GCGCTGGGGG CTCGCCAGTG GCAGATCATG CTGCTGTTTT ATCTCGAAGC GGCACTGAGC
GGGCTGGCCG GTGGGATCGC AGGCTGCGTC GCAGGCTGGG GATTGGCGAA AGCCATTGGC
CTGATGCTGT TCGGCGTACC CCTGAGTTTC GCGTGGATCG TGATTCCCTG CGTACTGGTG
ATCTCGGTGT TAATTGCCAT CATCGGAACG TGGTTCCCGG CGCGCCGGAT TGCCGGGCTG
TATCCGGTGG AGGTGCTGTA TGGGCGCTAA
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| Protein sequence | MLWRLLRQSW RRNIRRKSLA VLTVFLAAGL ISALLAVSID IGDKMARELK SYGANILIEP
AGQAALPALF GERSNPLEGQ DFLDEAELPN IKDIFWRNNI VGFAPLLSGD VEINGQPVAV
LGTFFSQPVA VPDEEDYRTG QMTVSPYWQV TGQWPQEPVT VENVAQTLVG KQLAAQTGWK
VGDKLALHGA KGDATVEVSG ILSSGGDEET RLVMPLATVQ SLLGLAGKIQ AIRVSALTVP
ENELSRRARE NLEALNAEEY DLWYCTAYVS SIAHQLEEAI SGSVVRPIWQ VAASEGVVID
KIQLLLAVVT FAALVASAMG IASLMTSTIM ERAKEIGLMK ALGARQWQIM LLFYLEAALS
GLAGGIAGCV AGWGLAKAIG LMLFGVPLSF AWIVIPCVLV ISVLIAIIGT WFPARRIAGL
YPVEVLYGR
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