Gene PC1_1386 details

Gene Information

• Locus tag: PC1_1386
• ID: 8132325
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1620940
• End bp: 1621467
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644864676
• Product: hypothetical protein
• Protein accession: YP_003016968
• Protein GI: 253687778
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3470] Uncharacterized protein probably involved in high-affinity Fe2+ transport

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATGC AAAAAAGTCT GATCGCGGGT GCCGTTATTG CCGGTATTTT CACCGCGCCT 
GCCGCGCTGG CGTTTAAAGA ATATCCAGCA GGTGAGCCGG TTTCCATGAA CGAAATGGAA 
ATTGCTGCTG TTTATCTGCA GCCTATCGAT ATGGAACCGC GTGGAATGGG CTTGCCTGCT 
GCGAAAGCGG ATATCCATCT GGAGGCCGAT ATTCACGCAG CTGAAGGCAA CAAAAACGGC 
TTCGGTGCCG GCGAGTGGAT GCCGTTCCTG ACTATCGCTT ATACCCTGAC CAACACCGAT 
ACCGGTGCCA AGCAGGAAGG TACCTTCATG CCGATGGTTG CCAGCGATGG CCCACACTAC 
GGCGCGAACA TCAAAATGAT GGGCGTGGGC AACTACAAAG TGACTTATCA CATCGATCCA 
CCATCAAAAG CCGGTATGCA CCGTCACACC GATGGTGAAA CGGGCGTCGG TCGCTGGTGG 
AAACCGTTTG ATGTCAGCTT TGACTTCAAA TACGTCGGTT TAGAATAA 

 

Protein sequence

MNMQKSLIAG AVIAGIFTAP AALAFKEYPA GEPVSMNEME IAAVYLQPID MEPRGMGLPA 
AKADIHLEAD IHAAEGNKNG FGAGEWMPFL TIAYTLTNTD TGAKQEGTFM PMVASDGPHY 
GANIKMMGVG NYKVTYHIDP PSKAGMHRHT DGETGVGRWW KPFDVSFDFK YVGLE