| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1383 |
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| Symbol | |
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| ID | 8132322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1613989 |
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| End bp | 1616139 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864673 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003016965 |
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| Protein GI | 253687775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.627092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAG TGCTTACCGT CTGCCCGTAT TGCGGGTCGG GCTGCAAAAT TAACCTGCTG
GTAGAGAACG GCAAAGTGGT TGGTGCAGAA GGGGCAAACG GCGTCACCAA CGAAGGTGAG
CTGTGCCTGA AAGGCTATTA CGGCTGGGAT TTTCTTAATG ACACGAAAAT TCTGACGCCG
CGTTTAAAAC AGCCGCTGAT CCGACGTCAG AAAGGCGCCC CCTTTGAAGC CGTGTCCTGG
GAGGAGGCTA TCGGCTTCGC CAGCTCCCGA CTAAAGGCTA TTAAAGAGAA GTACGGTGCC
GAGTCGATTA TGCACACAGG CTCGTCACGC GGCCCCGGCA ATGAAACGAA CTACGTGATG
CAGAAATTCG CCCGGGCGGT CACTGGAAAT AATAACGTCG ACTGCTGCGC CCGACTCTGC
CACGGCCCTT CGGTCGCCGG GCTACAGGTT ACGCTGGGCA ATGGCGCAAT GAGTAATTCC
ATCTGCGAAA TTGAAAAAAC CGACTGCATC CTGATTTTTG GCTATAACGC CGCGGACTCA
CACCCCATCG TGGCACGTCG GATCCTGAAA GCCAAAGCAC GCGGGGCAAA AATCATCGTG
TGCGATCCGC GCCATATTGA AACTGCCCGC ATCGCCGATC TGTGGCTGCC GCTGAAAAAT
GGCTCCAACA TGGCGCTGGT CAACGCTTTC GCCAACGTAC TGATTAACGA AGGCCACTAC
GATAAGGCTT ATGTCGCTCG TCATACCGAA GGCTTTGAGG AATTCAGCCG GACCGTTGCG
AAATACACGC CAGAATATGT TGCCGACATC ACCGGCCTGT CGCCGAAAGT GATTCGGGAC
GCGATGCGCA TGTATGCCGC CGCGCCATCT GCCACCATTC TCTGGGGAAT GGGCGTGACC
CAATGGGGGC AAGGTGTTGA TGTGGTCAAA GGACTGTCCG GTCTGGCGCT GCTGGCCGGC
AATCTGGGAC GTCCGAACGT CGGCGTCGGG CCAGTGCGTG GGCAAAACAA TGTACAAGGC
GCCTGCGATA TGGGCGCGCT GCCCAATATG TTCCCCGGTT ATCAAAAAGT CACGGATAAG
GCGGTGCTGG CGAAATTTGC TGATGCCTGG GGCGTGCCTG AACTCTCTGA CAAAGTAGGT
TACTCACTGA CCGATCTCCC ACACAAAATA CAGGAAGGGA AAATCAGGGC CAATTATGTA
ATGGGTGAAG ATCCGCTGCA AACCGAGCCG GACCTGTCGA TGCTGCGCGA TGCCTTTAAC
GAACTGGAAT TGCTGATCGT GCAGGACATC TTCATGACCA AGACCGCCGC GATTGCCGAT
GTGATTTTAC CTGCAACCTC CTGGGGCGAG CATGAAGGGG TCTATACCGC GGCCGACCGG
GGATTCCAGC GCTTTTATAA GGCTGTCGAG CCACAGGGCG ATGTGAAACC CGACTGGGAA
ATCATCAGCC TGATGGCAAC GGCGCTCGGA TATCCAATGC ACTATCGCAA CACGCAGGAG
ATCTGGGATG AACTGCGAGC ACTCTGCCCC CTGTATTACG GCGCGACCTA CGAGAAAATG
GCGGGGCTGG GCTATGTGCC CTGGCCATGC CCGACGGAAG ACAGCCCCGG AACGCCGTGG
CTGTATGCCG GCAACAACTT CGATCGCCCC GGAGGGAAAG CCCTGCTGTT GACGGCCGAA
TGGCGACCGC CGATGGAGTT GGTGGACGAG GATTATCCGC TGGTATTGTG CACCGTGCGC
GAAGTCGGCC ACTATTCCTG CCGATCCATG ACAGGCAACT GCACGGCATT ACAAACGCTG
GCGGATGAAC CCGGCTATGT GCAGGTTAGC CCATACGACG CCGAACGTTT AGGCATCCGC
GATCAACAGT TGGCCTGGAT CTCATCGCGA CGCGGTAAGG TTATCTCTCG CGTTGCCGTC
AGCGAGCGCA TCAACAAAGG TGCCGTGTAT ATGACCTACC AATGGTGGAT CGGCGCCTGT
AATGAACTGA CGTTAGATCA CCTCGATCCA GTATCTAAAA CGCCGGAATA CAAACACTGT
GCGGTTAAAC TGGAGGCGAT TGACGACCAG CAAGCGGCGG AGAACTACGT ACAGCAGGAA
TACAGCCAGT TGAAAGATCG GCTGCGTACT ACCGCAGAAA ACGTCAATTA A
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| Protein sequence | MQKVLTVCPY CGSGCKINLL VENGKVVGAE GANGVTNEGE LCLKGYYGWD FLNDTKILTP
RLKQPLIRRQ KGAPFEAVSW EEAIGFASSR LKAIKEKYGA ESIMHTGSSR GPGNETNYVM
QKFARAVTGN NNVDCCARLC HGPSVAGLQV TLGNGAMSNS ICEIEKTDCI LIFGYNAADS
HPIVARRILK AKARGAKIIV CDPRHIETAR IADLWLPLKN GSNMALVNAF ANVLINEGHY
DKAYVARHTE GFEEFSRTVA KYTPEYVADI TGLSPKVIRD AMRMYAAAPS ATILWGMGVT
QWGQGVDVVK GLSGLALLAG NLGRPNVGVG PVRGQNNVQG ACDMGALPNM FPGYQKVTDK
AVLAKFADAW GVPELSDKVG YSLTDLPHKI QEGKIRANYV MGEDPLQTEP DLSMLRDAFN
ELELLIVQDI FMTKTAAIAD VILPATSWGE HEGVYTAADR GFQRFYKAVE PQGDVKPDWE
IISLMATALG YPMHYRNTQE IWDELRALCP LYYGATYEKM AGLGYVPWPC PTEDSPGTPW
LYAGNNFDRP GGKALLLTAE WRPPMELVDE DYPLVLCTVR EVGHYSCRSM TGNCTALQTL
ADEPGYVQVS PYDAERLGIR DQQLAWISSR RGKVISRVAV SERINKGAVY MTYQWWIGAC
NELTLDHLDP VSKTPEYKHC AVKLEAIDDQ QAAENYVQQE YSQLKDRLRT TAENVN
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