| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1349 |
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| Symbol | |
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| ID | 8132287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1573263 |
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| End bp | 1575134 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864639 |
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| Product | PTS system, beta-glucoside-specific IIABC subunit |
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| Protein accession | YP_003016932 |
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| Protein GI | 253687742 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01995] PTS system, beta-glucoside-specific IIABC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.495868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CAGCAGCAGA TAATAACGCG ACAGCCTATG CCACCACCGC GGAAAAAATC
ATCACATTCG TCGGCGGGAT TGATAACATT GAGCACATTG AACACTGCTC TACGCGGCTA
CGGCTGAGCC TTTATGACAA TAGTCAGGTG AACCAGCGCG AACTGGAAAA AGTGCAGGGC
GTGCTGGGCG TTCGGGTCAA CGTCCAGTGT CAGGTGATCA TCGGCAGTGA AGTCATGCAG
GTGTATGACG CGGTGCAGAA CCTCGCCGCT GGCCGTAAGA AAACGGATCG CACCGTGCCG
GCAAAAACCA ACCGCACGGC TTTTGTTATC GACTTTATCA TCAGCGTTTT TCAGCCTCTG
GTTCCTGCGA TTGCTGGCGG CGGCGTGCTC AAATCGCTGT TACTGCTGCT GGATCTACTC
GGCTGGCTCA CCAAAGACAG CTCAACCTAC AAAGTGCTGG ATAACATCGG CTCCGCACCG
CTCTATTTTC TGCCGATTCT GGTGGGAATC ACCACTGCGA TGAAGCTGAA AGTCAATGTG
CTGGTCGCCG TTTCCGCCGT CTCTGTCATG GTGTTACCTG CCATGTCTAA ACAGCTGGCG
GAAGGCGCGG AATTTCTCTC TCTCGATCTG AAAAATGTCG CTTACGCCTC GCAGGTTTTC
CCGGCGATTC TGTGCGTTAT TTTCTATGCG CAAACCGAAA AGATCTTCAA CCGTTACTCG
CCGAGCGCTC TGCGTATTTT CCTGTCGCCC ATGCTCTCGC TGCTGGTCAC CGTTCCCGTC
ACATTGCTGG TTCTTGGCCC GCTCGGTTAT GAACTCGGCG CAGGTCTGGC GACGGCGATC
CTCTGGCTTT ACAGCAAATT GGGCTTTGTG GCGACGGCGT TGCTCGCTGC TGCGCTGCCA
TTCATGGTGG CGTCGGGGAT GCATAAGCCG ATGCTGCCTT ATGCCGTTTC CTCCATGAGT
CAGTTTGGTA AGGAAATGCT TTACCTGCCC GCGTCGCTCG CACACAACAT CGCCGAATCG
GGAGCCTGCA TGGCGATAGC CCTCAAAAGC AAAGACAAAA CGTTAAAATC GACGGCGCTT
TCAGCGGGTA TTTCCGCCCT GTTCGGCATT ACTGAACCCG CGCTATACGG GATCACGCTG
CTGAATAAAA AAGCACTCTA CAGTGTGCTG GCAGGTAGTC TGGTCGGCGG CGCGTTTATC
GGCTGGATGG CGATTGAAGC CTTTGCGCTG GTTGGTCCCG GTCTGGCTAG CATCTCCATG
TTTGTCTCGC CGGAAAATAG CTGGAATATC GTCTATGCCA TCGCTGGGAC GGCGCTCTCT
TTTGCCATCG CCTTTCTCTC CGCGCTGTTC CTCTGGCGGG AAGAAAAACC CGTCGCTGCG
GTAGAGGAAG AAGAAGCCCA TCGCGCTATC GCTGAGTGCC AGTTCGCCAG CCCGATTGAA
GGAAAAGTGA TCCCGCTGGA AAGCGTAAAC GATGAAATTT TCTCCAAACG TATCATGGGG
GATGGCGTTG CCATCATCCC CGAAAAAGGC GTGCTCTACG CCCCGGCGAG CGGCACGATT
GAGAACGTAT TTGAAACGGG CCATGCCGTC AGTATGCTCA CCGACAGCGG TGCCGAACTG
ATTTTCCATA TCGGTATCGA TACTATCAAA CTCAACGGTC AGGGCTTTCA GCCAAAAGTC
ACAGCTGGCC AACAGGTTAA TACCGGCGAT GTCCTCGTTG AATTTGACCT CGATAGCCTC
ATCGCCGCGG GTTACGATCC CGTTGTCATG ATGGTTATCA CCAACAGCGA GCGCTTCCGC
GTGATACCGG AAGCTACTGA TGCCGTCCTC TCTCCCCACA CCATCATCAT GACCTTAAAG
GAGTCTGTGT AA
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| Protein sequence | MSQTAADNNA TAYATTAEKI ITFVGGIDNI EHIEHCSTRL RLSLYDNSQV NQRELEKVQG
VLGVRVNVQC QVIIGSEVMQ VYDAVQNLAA GRKKTDRTVP AKTNRTAFVI DFIISVFQPL
VPAIAGGGVL KSLLLLLDLL GWLTKDSSTY KVLDNIGSAP LYFLPILVGI TTAMKLKVNV
LVAVSAVSVM VLPAMSKQLA EGAEFLSLDL KNVAYASQVF PAILCVIFYA QTEKIFNRYS
PSALRIFLSP MLSLLVTVPV TLLVLGPLGY ELGAGLATAI LWLYSKLGFV ATALLAAALP
FMVASGMHKP MLPYAVSSMS QFGKEMLYLP ASLAHNIAES GACMAIALKS KDKTLKSTAL
SAGISALFGI TEPALYGITL LNKKALYSVL AGSLVGGAFI GWMAIEAFAL VGPGLASISM
FVSPENSWNI VYAIAGTALS FAIAFLSALF LWREEKPVAA VEEEEAHRAI AECQFASPIE
GKVIPLESVN DEIFSKRIMG DGVAIIPEKG VLYAPASGTI ENVFETGHAV SMLTDSGAEL
IFHIGIDTIK LNGQGFQPKV TAGQQVNTGD VLVEFDLDSL IAAGYDPVVM MVITNSERFR
VIPEATDAVL SPHTIIMTLK ESV
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