| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1343 |
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| Symbol | |
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| ID | 8132281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1566318 |
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| End bp | 1567154 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864633 |
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| Product | Myo-inositol catabolism IolB domain protein |
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| Protein accession | YP_003016926 |
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| Protein GI | 253687736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.185473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGAC TCTTATCACG CCATCGTTCC CCTGACGAAC ATGGCCGTAC GCAGCACATC
ACGCCGGAAA CGGCAGGCTG GCGCTATGTG GGATTCGATG TGTATCAACT GGTACCGGAA
CAGGTGCTAT CGCTGCCTGC CAGCGACAAC GAGCGCTGTC TGGTGCTGGT GAGCGGCAAA
GCGACGGTTG TCACTCCGAG TGAGCGCTTC GAGCAGATTG GCGACAGAAT GAGTCCGTTT
GAGCGTAGAA AACCCTATGC AGTTTATGTC ACGGCGGGAG AGACGGTGAC GGTAACGGCG
CACACGGCGC TGGAGCTGGC GGTTTGTGCC GCACCGGGGC TTGGCACGCA CCCAACCCGA
CTGATTGCGC CGCAGGATAT CGACGCCGAA CAGCGTGGTG TCGGCAATAA TCAGCGCTAT
GTACATAACA TTTTGCCCGA AGACAAAGCA GCAGACAGCC TGTTGGTGGT CGAAGTGTAC
ACCGATGAAG GTTGCACCAG TTCTTACCCT AGCCACAAGC ACGATGTCGA TAATCCGCCG
CAGGAAACCT ATCTGGAAGA AACTTACTAT CATCGTTTGA ACCCAGGGCA GGGGTTCTGT
CTGCAACGCG TATATACCGA TGACCGTTCA TTAGATGAAT GCATGGCGGT ATACGATAAA
GACGTGGTGC AGGTGCCGCG TGGCTACCAC CCGGTCGCCA CCATCGCAGG CTATGACAGC
TATTACCTAA ATGTGATGGC AGGCCCTACG CGTCAGTGGC GTTTTACCTG GGAAGCGGAT
CACCAGTGGA TCAACAGCCC CGAGTATGCG GATAAGCACG GGCAGGGCAA AGCGTAG
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| Protein sequence | MSRLLSRHRS PDEHGRTQHI TPETAGWRYV GFDVYQLVPE QVLSLPASDN ERCLVLVSGK
ATVVTPSERF EQIGDRMSPF ERRKPYAVYV TAGETVTVTA HTALELAVCA APGLGTHPTR
LIAPQDIDAE QRGVGNNQRY VHNILPEDKA ADSLLVVEVY TDEGCTSSYP SHKHDVDNPP
QETYLEETYY HRLNPGQGFC LQRVYTDDRS LDECMAVYDK DVVQVPRGYH PVATIAGYDS
YYLNVMAGPT RQWRFTWEAD HQWINSPEYA DKHGQGKA
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