| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1339 |
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| Symbol | |
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| ID | 8132277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1561149 |
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| End bp | 1562180 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864629 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003016922 |
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| Protein GI | 253687732 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.698639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGC AGCCGCTTTC TAAGAGCATT ACGCCGTCCA ATCCGCGCGG ACGTTTTGAT
CCGATTGCTT TTTTCGAACG CTTCGGCGTG TTTATTTTCA TGATTTTGCT GCTGATCTTC
TTTCAGTCGC AGAACAGTAA CTTTTTGTCC GAACGCAACA TCACCAACAT CCTGACCGAA
GTTTCCATCT ACGGCATCAT GGCGGTAGGG ATGACGTTCG TCATTCTGAC CGCCGGGATC
GACCTGTCCG TCGGCTCAAT TCTGGCGGTG TGTGCCATCA CCGCCGCTTC GGTAATTAAA
GGCGACAACT TCACCACCGT TGATCCTGAT GCCTGGTTCG GCTTGAGCTG GCTGGTTGCG
TTGGGCATCT GTCTGGCAAT GGGTACCTTC ATTGGTTTCC TGCATGGTTT AGGGGTAACC
AAACTGCGTC TGCCACCGTT TATCGTCACG CTGGGCGGGA TGACGATCTG GCGCGGGTTA
ACGCTGGTGA TGAACGACGG CGCGCCGATT GCTGGTTTTG ACCCCGGCTA TCGCTGGTGG
GGGCGGGGCG AGATTCTCGG TATTTCGGTG CCGATCTGGA TCTTCGCGCT GGTCGCCTTG
CTGGGCTATC TGGCGCTGCA TAAAACCCGC TGGGGCCGCT TCGTCTACGC CATTGGCGGC
AACACTGAAG CTGCGCGTCT GGCTGGGGTG AATGTGCAGC GAGTGCTGGT CAGCGTTTAC
GTCGTGATTG GCTGTCTGGC CGGGCTGGCG GGCTTTATTC TCAGCGCCCG TCTCGGCAGC
GCAGAAGCGG TCGCGGGGAT CACCTTCGAG CTGCGCGTCA TCGCCTCGGT GGTCATCGGC
GGCACCTCGC TGATGGGCGG CTACGGCCGG ATCAGCGGCA CCATTATCGG CTCGATCATC
ATGGGGATCC TGATTAACGG ACTGGTGTTG ATGAACGTAT CGGCCTACTA CCAACAGATC
ATCACCGGGT TAATTATCGT GCTGGCCGTG GCGTTCGACA CCTATGCCAA GAGCCGTCGC
GGCGCTATCT GA
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| Protein sequence | MSQQPLSKSI TPSNPRGRFD PIAFFERFGV FIFMILLLIF FQSQNSNFLS ERNITNILTE
VSIYGIMAVG MTFVILTAGI DLSVGSILAV CAITAASVIK GDNFTTVDPD AWFGLSWLVA
LGICLAMGTF IGFLHGLGVT KLRLPPFIVT LGGMTIWRGL TLVMNDGAPI AGFDPGYRWW
GRGEILGISV PIWIFALVAL LGYLALHKTR WGRFVYAIGG NTEAARLAGV NVQRVLVSVY
VVIGCLAGLA GFILSARLGS AEAVAGITFE LRVIASVVIG GTSLMGGYGR ISGTIIGSII
MGILINGLVL MNVSAYYQQI ITGLIIVLAV AFDTYAKSRR GAI
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