| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1338 |
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| Symbol | |
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| ID | 8132276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1559589 |
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| End bp | 1561136 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864628 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016921 |
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| Protein GI | 253687731 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.224173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAC CCCTACTGAA GATTACCAAT CTGGCAAAGA GCTTCTCCGG CGTGTGGGCG
CTGAGCAACG CACAGCTGAC CGTACAGCCG GGAGAGATTC ATGCGTTATT GGGCGAAAAC
GGCGCGGGTA AATCGACGCT ATTGAAGGCG CTGGCTGGGG CGCAACCGCA AACCAGCGGC
GACATCTGGT TTGGCGGCGA AAAGCTGTTA CCGCTTGAAT CGCCGGTTGA GCGCCAAAAG
CGGGGGATTA TCACCATTTA TCAGGAATTT AACCTGCTGC CCAATATGAG TGTGGCAGAG
AACATGTTCC TGGGGCGTGA GCCGCAGCGC AGCGGCGTAT TTGTGGATGC TTTGGCAGTC
AATCGTGAGG CGAAAGCGGT ACTGGATTAT CTGAAATTGA ACATTGCGCC GACGACGCAG
GTGGCACGTT TGAGCGTGGC GCAGCAGCAA ATGGTGGAAA TCGCCAGAGC GCTGACATTG
AACGCCAAGC TGATTGTGAT GGATGAGCCG TCGGCGGCGT TGAGCGACAG TGAAGTCGAC
AGCCTGCACC GCGTGGTGCG CGAGCTTAAA GGACGCGGCG TGAGCGTGGT GTATGTCACG
CACCGGCTGC ACGAAGTCTT CCAACTGTGC GATCGATTTA CCGTGTTTCA GGACGGCCGC
TACACCGGTT CCGGCGACGT CGCCAGCACG AATGTGCAGG AGATTATTCG CCTGATGGTC
GGTCGCGACG TGGTGTTTAA TCGCCGTCCG CCTTCAGAAA CGCACCATCA GGATAAGCCG
GTACGTCTGG CGGTGAAGGG CTTAAGCCGG GAAAAACCGC CGCTGGATGC GCACGGCATC
GCGTTAAAAG ACATCAATTT CCAGGTACAT GCGGGCGAAG TGCTCGGGAT CGCCGGACTG
GTGGGCGCAG GCCGTACGGA AATTGCACGC TGTCTGTTTG GTGCCGACGC ATTCTCAACC
GGTGAATTTG TGCTGGATGG CACCCCTTAC CACCCGTCTA CGCCGTTGCA TGCGCTGTCG
CAAGGCATCG CACTGGTGCC GGAAGACCGT AAGAAAGAAG GCGCGGTGTT GGGGTTATCG
ATCAGGGAAA ACATTTCACT CTCCAACCTC TCATCGCTCA TGCGCTGGCG CTGGTTTGTG
AACACCAGTA AGGAAGACGA TCTGATTGAA GCCTACCGTC AGGCGCTGCA CATCAAGATG
GTGAACAGCG AGCAGGAGGT ACGCAAGCTG TCGGGCGGTA ACCAGCAAAA GGTGATTCTT
GCTCGCTGTA TGGCGCTGAA TCCCAAGGTA TTGATTGTGG ATGAGCCCAC GCGCGGCATC
GATGTCGGCA CCAAGTCCGA AGTGCATCAG GTGCTGTTCG ATATGGCGAA ACGGGGCGTC
GCCGTGATTG TGATTTCCTC CGACCTGCCG GAAATCATGG CGATTTCCGA CCGCATCATC
ACGCTCAGCG AAGGGCGAAT TAGCGGGGAA ATTCATGGCG ATGACGCCAC AGAAGAAAAA
CTGATGACGA TGATGGCCAT TTGCCACGAC GCATTACACG CAGCATAA
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| Protein sequence | MTEPLLKITN LAKSFSGVWA LSNAQLTVQP GEIHALLGEN GAGKSTLLKA LAGAQPQTSG
DIWFGGEKLL PLESPVERQK RGIITIYQEF NLLPNMSVAE NMFLGREPQR SGVFVDALAV
NREAKAVLDY LKLNIAPTTQ VARLSVAQQQ MVEIARALTL NAKLIVMDEP SAALSDSEVD
SLHRVVRELK GRGVSVVYVT HRLHEVFQLC DRFTVFQDGR YTGSGDVAST NVQEIIRLMV
GRDVVFNRRP PSETHHQDKP VRLAVKGLSR EKPPLDAHGI ALKDINFQVH AGEVLGIAGL
VGAGRTEIAR CLFGADAFST GEFVLDGTPY HPSTPLHALS QGIALVPEDR KKEGAVLGLS
IRENISLSNL SSLMRWRWFV NTSKEDDLIE AYRQALHIKM VNSEQEVRKL SGGNQQKVIL
ARCMALNPKV LIVDEPTRGI DVGTKSEVHQ VLFDMAKRGV AVIVISSDLP EIMAISDRII
TLSEGRISGE IHGDDATEEK LMTMMAICHD ALHAA
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