| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1337 |
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| Symbol | |
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| ID | 8132275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1558584 |
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| End bp | 1559522 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864627 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003016920 |
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| Protein GI | 253687730 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TCATCAGCGT TTCCGCAATC GCCATCGCAC TGGGTCTGTC TGGTCTTGCT
CAGGCCCAAA ATGAACAAAT CGTTTTCAGT ACGCCGAATC TCGCTATGCC GTTTGAAGTT
CATATGCAGC GCACCGCAGT TAAAGCCGCC AAAGAACTGG GCGTGAATTT GCAGGTGCTG
GATGGGCAGG GTAGCTCGCC GAAGCAGGCC GCCGATTTGG AAAATGCCAT CACGCGTGGC
GCACTCGGCT TCGTGGTGTC ACCGAATGAT GTTAACGCGG TTTCCAGTGC AGTGACCGAA
ATTCAGGATG CCAAGTTGCC AGTCGTGACG CTGGATCGTT CGGTGAAAAC GGAAAAAGCC
GTGCCGCATT TTGGGGCGAA TAACTACAAA GGCGGTCAGG CGATTGCCGA CTATGTCAAA
ACTAAATTCC CGAATGGCGC AGAGATCATT CTGCTAACCG GCCAGCCGGG CTCTTCTTCT
AATATCGAGC GGACGCAGGG GATTCGTGAC AGTCTGAAAG CGGGCGGCAG CAAGTACCGC
ATTGTGGCCG ACCAGACGGG GAACTGGATG CGTTCCGAAG GGATGCGCAT CGTAGAAAGT
GTTCTGCCGT CGCTGCCTAA ACGCCCACAG GTGATCCTCT CTGCGAATGA CGACATGGCG
CTGGGCGCGA TTGAAGCGTT ACAGGGGCAA GGTCTGAAAC CTGGCGAGGT AATGGTAACC
GGTTTTGATG CTGTGCCAGA AGCATTGGCT CGTGTACGTG ACGGCTGGCT GGCGGTTACC
GCCGATCAGC GTCCGGGCTA CGCTGTGACC ACCGCGTTGA CGCAATTGAC CAATAACATC
CGCAGCAAAG CGCCGATCAC CGGGGCAGAC TACCAACCGA CCATGATTAC CAAAGATAAC
CTGAACGATG CCGAACGCAT TGGCGAAGCG GGTAAATAA
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| Protein sequence | MKKIISVSAI AIALGLSGLA QAQNEQIVFS TPNLAMPFEV HMQRTAVKAA KELGVNLQVL
DGQGSSPKQA ADLENAITRG ALGFVVSPND VNAVSSAVTE IQDAKLPVVT LDRSVKTEKA
VPHFGANNYK GGQAIADYVK TKFPNGAEII LLTGQPGSSS NIERTQGIRD SLKAGGSKYR
IVADQTGNWM RSEGMRIVES VLPSLPKRPQ VILSANDDMA LGAIEALQGQ GLKPGEVMVT
GFDAVPEALA RVRDGWLAVT ADQRPGYAVT TALTQLTNNI RSKAPITGAD YQPTMITKDN
LNDAERIGEA GK
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