| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1327 |
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| Symbol | |
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| ID | 8132265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1545545 |
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| End bp | 1546969 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864617 |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003016910 |
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| Protein GI | 253687720 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.294079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATACC GTCATCTTAA ACGTTTCCCT GAGGGGTTTT TGTGGGGCGC GGCGACATCG
GCTTATCAGG TTGAAGGGGC ATGGAATGAG GATGGCAAGG GGCCATCGGT GATTGATGCC
AGAACGTCCT ATCCTGAGGG CACCACGGAC TTTAAAGTCG CCAGCGATCA TTACCACCGC
TACAAGGAAG ATGTGGCGCT GTTTGCCGAT ATCGGCTTTA AAACCTACCG TTTTTCCATC
GCCTGGAGCC GCATCATTCC CGATGGCAGC GGTGAGGTAA ACCCGGCGGG CATTGCGTTT
TACCACAATC TTATCGATGA ACTGCTGCAT TACGGTATTG TGCCGATCGT TACGATGTAC
CATTTCGATC TGCCGCAGGC GTTGCAGGCC AAAGGCGGGT GGTACAGCCG GGAAACGGTG
GATGCGTTTG AACGTTTTGC CAACGTACTG TTTGATGAAT ACGGCGAAAA AGTGCAGTAC
TGGCTGACCA TCAACGAACA GAACATGATG ATTTTGCACG GTTCCGCACT GGGTACGTTG
GATCCCACGC TGGAAAATCC GAAGCAGAAT CTCTACCAAC AGAACCACAA CATGCTGGTG
GCACAGGCAA AAGCGATGAA TGCGCTACAT GAAAAAGTGC CCGGCGCGAA AATTGGTCCG
GCACCCAACA TTGCGCTGAT TTACCCGGCA TCAGCGAAGC CTGAAGATGT GATGGCCGCG
TTCAACTATA ACGCGATTCG CAATTGGTTA TATCTGGATA TGGCGGTGCA CGGCCGTTAC
AACACGGCGG CATGGCGCTA TATGGAAGAG AAAGGCTATA CGCCGGAGAT TCTGCCCGGC
GATATGGACA TTCTGGCATC GGCCAAACCC GATTTCATCG CGTTTAACTA CTACACCTCG
CAAACGGTTG AAGCCAGCAA GGGCGACGGA TCGGATGAAA TTGCACGTGG TGGCGATCAG
CACCTGAAAT CAGGTGAAGA AGGCGTACAT CGTGGCGCAA CCAATCCATT TTTGCAGAAA
AATGCCTTTG GCTGGGAAAT CGATCCCATC GGTTTCCGCA ATACGCTGCG TGAGCTGCAC
GACCGCTACC ATTTACCGCT GATCATTACG GAGAATGGGC TGGGCGCGTT TGATACGCTG
GATGAAAACG GTGAGGTTAA CGATGATTAT CGCATCGACT ACCTGCAACG CCACATTGAG
CAAATCCAGC TTGCGATCAC TGACGGTGTG GATGTCTTCG GCTATACGCC ATGGTCGGCG
TTGGATCTCA TTTCCACCCA TCAGGGATGC TCAAAACGCT ACGGTTTTAT TTACGTGAAC
CGTGAAGAGT TCGATCTGAA AGATTTGCGG CGTATCCGTA AAAAAAGCGC ATACTGGTAT
GCTAATGTCA TTAAAAACAA TGGGCTGGGT AGCTCAGAAG CGTAA
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| Protein sequence | MKYRHLKRFP EGFLWGAATS AYQVEGAWNE DGKGPSVIDA RTSYPEGTTD FKVASDHYHR
YKEDVALFAD IGFKTYRFSI AWSRIIPDGS GEVNPAGIAF YHNLIDELLH YGIVPIVTMY
HFDLPQALQA KGGWYSRETV DAFERFANVL FDEYGEKVQY WLTINEQNMM ILHGSALGTL
DPTLENPKQN LYQQNHNMLV AQAKAMNALH EKVPGAKIGP APNIALIYPA SAKPEDVMAA
FNYNAIRNWL YLDMAVHGRY NTAAWRYMEE KGYTPEILPG DMDILASAKP DFIAFNYYTS
QTVEASKGDG SDEIARGGDQ HLKSGEEGVH RGATNPFLQK NAFGWEIDPI GFRNTLRELH
DRYHLPLIIT ENGLGAFDTL DENGEVNDDY RIDYLQRHIE QIQLAITDGV DVFGYTPWSA
LDLISTHQGC SKRYGFIYVN REEFDLKDLR RIRKKSAYWY ANVIKNNGLG SSEA
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