Gene PC1_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1322 
Symbol 
ID8132260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1539071 
End bp1539748 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID644864612 
Productputative lipoprotein 
Protein accessionYP_003016905 
Protein GI253687715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00089684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAA TAAAACGAAT AGCAGAAATG AAAGCGCTGA TTGCCATCCC TTTTTTCTCT 
CTTCTATTAA CCGGTTGTTC CCAAAATATG GAACAGGTGG GAAAAACCTT CAAACTGGCA 
TTTTGGGGTC AGGATGATAC CCATGTGACG GCCAAACAGA TTGCCAATAC GCCCTATGCA 
TCAGCTTATC TGAAAGTGGG TAAGGCACCA CAGGCGTTTG TCGTGCTCGC TTTTGTCGAA 
CAAAATCAGT TGAAATGGAT TGGGGCCGAT AAAAATATGG TATCGACCCA ACATGGCCGT 
CTGGTGAAAA CGCAGGGCTT CGGCGAAGAC ATTACCTATG TGGACAACCT GCAACAAGAT 
CCCCTGACAT TAGGCCTGTT GAAGACATCG ACGCCAATGA CATGGCAAAG CCGGGTTGAG 
TGGGCTCAGG TCTTCCGTGG CGGTTACGCT ACCATGTCCG TTTTTCATGC CCGCGGTAAA 
GAAACCATAA AAATTCTGGA TACCTCGCGT GAGCTGCTGC GCTTTGATGA GCAGGTTACC 
GTCCCCACAC TGAACGAATC TTACACGAAT AGCTACTGGC TTGATCCGGC CAACGGAAAT 
GTGGTCCAAA GCCAGCAGTA TATGGGGCCG GATATGGCAT TGGTAAAATT CACCGTATTA 
AAACCCTACG CACAATAA
 
Protein sequence
MIRIKRIAEM KALIAIPFFS LLLTGCSQNM EQVGKTFKLA FWGQDDTHVT AKQIANTPYA 
SAYLKVGKAP QAFVVLAFVE QNQLKWIGAD KNMVSTQHGR LVKTQGFGED ITYVDNLQQD 
PLTLGLLKTS TPMTWQSRVE WAQVFRGGYA TMSVFHARGK ETIKILDTSR ELLRFDEQVT 
VPTLNESYTN SYWLDPANGN VVQSQQYMGP DMALVKFTVL KPYAQ