Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1317 |
Symbol | |
ID | 8132255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1534093 |
End bp | 1535466 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644864607 |
Product | Phosphomannomutase |
Protein accession | YP_003016900 |
Protein GI | 253687710 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.214391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT TAACTTGTTT TAAGGCCTAT GATATTCGTG GCCGTTTGGA AAGCGAATTA AATGATGATA TTGCTTACCG AATTGGTCGT GCGTATGGCG AATTACTCAA ACCTACGCGT GTTGTTGTCG GTGGTGATAT CCGTCTGACA AGTGAGAGCC TGAAATTATC TCTGGCCGAT GGGCTGATGG ACGCAGGTGT TCATGTGCTG GATATCGGAT TATCCGGTAC TGAAGAGGTC TATTTCGCGA CTTTCCATCT TGGAATTGAT GGTGGTATTG AAGTAACAGC AAGCCATAAT CCAATTGATT ATAATGGTAT GAAACTGGTT CGCAGTGGTG CGAAACCCAT CAGTGGTGAT ACGGGATTAC GAGATATACA GTTATTGGCT GAAAAAAATA ACTTCTCCCC CGTCCAGCAG GACGCCCGCG GCAGCTACAC CAAGATCTCT ATACTTGAAA GTTACATTGA ACATTTAATG GGCTACATTA AGCCTGAAAA TTTCAAACCG TTGAAACTGG TTATTAATAG TGGCAACGGT GCTGCAGGTC ATATTATTGA TGCCCTAGAG GAACAGTTCA ATAAACTCAA TATGCCTGTA ACCTTTATCA AGGTACACCA CGAACCCGAT GGTTCATTTC CGAATGGTAT CCCCAACCCG CTGTTGCCTG AATGTAGAAA AGATACTTCT GATGCAGTTA TCGCACATTC GGCAGATATG GGGATTGCGT TTGATGGTGA TTTCGATCGC TGTTTTCTGT TTAACCATCT TGGCGAATTT ATCGAAGGAT ACTATATCGT TGGTTTATTG GCCGAAGCTT TCCTTCAAAA GGAACCTGGT GCAAAAATCA TCCATGATCC TCGGTTGAGC TGGAACACGA TTGATATCGT CAATTCCCAT CAGGGCAAAC CGGTTATGTC AAAGACCGGC CATGCCTTTA TTAAAGAACG GATGCGGCAA GAAGACGCGA TCTATGGTGG GGAAATGAGT GCGCACCACT ATTTCCGTTC TTTTGCGTAT TGCGATTCAG GGATGATTCC GTGGCTGTTA GTTGCGGAAT TACTCTGCGT AAAAGAGAAA AGCTTACGGG ATCTGGTGAG TGAAAGAATG CAGGCATATC CGGCGTCTGG CGAAATTAAC TCTACGCTGA ATGAACCCGC TAAGGCGATA GATCGTGTTA AAGCCGCTTA CTTACCTAAC GCGATGTCTA TTGACGAAAC TGATGGCATC AGCCTGGAGT TTGCGGATTG GCGCTTTAAC CTTCGTTCTT CTAACACAGA GCCTGTTGTT CGCTTAAACG TTGAGTCTAA AGCTGACCAT GCCCTGATGA TTGAGAAAAC TGAGGATATT CTACGGTTAC TACGACAGAA CTGA
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Protein sequence | MEKLTCFKAY DIRGRLESEL NDDIAYRIGR AYGELLKPTR VVVGGDIRLT SESLKLSLAD GLMDAGVHVL DIGLSGTEEV YFATFHLGID GGIEVTASHN PIDYNGMKLV RSGAKPISGD TGLRDIQLLA EKNNFSPVQQ DARGSYTKIS ILESYIEHLM GYIKPENFKP LKLVINSGNG AAGHIIDALE EQFNKLNMPV TFIKVHHEPD GSFPNGIPNP LLPECRKDTS DAVIAHSADM GIAFDGDFDR CFLFNHLGEF IEGYYIVGLL AEAFLQKEPG AKIIHDPRLS WNTIDIVNSH QGKPVMSKTG HAFIKERMRQ EDAIYGGEMS AHHYFRSFAY CDSGMIPWLL VAELLCVKEK SLRDLVSERM QAYPASGEIN STLNEPAKAI DRVKAAYLPN AMSIDETDGI SLEFADWRFN LRSSNTEPVV RLNVESKADH ALMIEKTEDI LRLLRQN
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