| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1310 |
|---|
| Symbol | |
|---|
| ID | 8132248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1527036 |
|---|
| End bp | 1528091 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644864600 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003016893 |
|---|
| Protein GI | 253687703 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC CTCAGCTAGG TATTCTTATG TATGACATTA TATTTGTTAC CCATCTCCCT
GCTTTTTATA AAATAAATCT TTATAACGAA ATTGCAAAAA ATAAAAGGAT TCTTGTTGTT
TTTATTTCCA GCGGTTCTGA AATAAGAAAT GACGATTTTA TTAAGGGTGA AATGAATTTC
GAATATAAAT TCATCAATGA AGGCGGTTTT GAGTTAAGAC AGAAGTACGC TTCTTTGTTC
CATCTGTTGA AATTATTACG TTCTGTTCAG TATAAAAAAA TTGTCATAGG TGGATGGGAT
CTTATTGAGT TTTGGGGAGT GGCCTTTACT AGCCCACGTG CGAAAAACGC GGTTGTGATC
GAGTCTACTC GCTATGAGAG CGTGGTTTCT GGATTAAAAG GAAAAATAAA AAGGTTGTTT
CTGAGTCGAA TCTCAACAGC TTTTTGTAGT GGTGCTCCTC ATAGAGAACT TATTGAGTCA
CTGTATTTTC CGGGCGAGAT TATAACTACC TACGGAGTGG GGTTGAACAA TCACGCTATG
GAGAATCATG TTAGACAGGA TAAACACACC TATCGTGGCC AATTTTTGTA TGTTGGCCGA
TTAGCTGAAG AAAAAGGTTT GGATTTCCTT TTGGATTTTT TCCGTACTCA TCCTGAGTTG
TCACTGACTA TTGTTGGCGA TGGGCCGCAG AGAGAAAGCC TGGAGAATAG GGCTAGCGAG
AATGTTCTGT TCAAAGGGTA TGTTAATAAT TCTGAGCTAA ATTCTATTTT TGTCGAGCAT
GATATTTTTA TTTTCCCTTC AACTTCTGAG CCATGGGGAT TGGTTGTTGA GGAAGCACTT
GCATACGGCT TACCTGTTAT TTGTTCAGAT AAAGTTGGAT GTGGGCAAGA TCTTGTCGAG
GCATATAAAG CAGGAATAGT GTTTCACGTT AACGATGCGT CTTCGTTAAG TCATGCTGTA
TCAGAAATGA GTGAGCGGTA TGATGAGTTT TGTTCCAATA TATCATTAAT AAGTTTTGAT
GAAATTAATA GAAAACAAAT AGAGTCATAC TACTGA
|
|---|
| Protein sequence | MKNPQLGILM YDIIFVTHLP AFYKINLYNE IAKNKRILVV FISSGSEIRN DDFIKGEMNF
EYKFINEGGF ELRQKYASLF HLLKLLRSVQ YKKIVIGGWD LIEFWGVAFT SPRAKNAVVI
ESTRYESVVS GLKGKIKRLF LSRISTAFCS GAPHRELIES LYFPGEIITT YGVGLNNHAM
ENHVRQDKHT YRGQFLYVGR LAEEKGLDFL LDFFRTHPEL SLTIVGDGPQ RESLENRASE
NVLFKGYVNN SELNSIFVEH DIFIFPSTSE PWGLVVEEAL AYGLPVICSD KVGCGQDLVE
AYKAGIVFHV NDASSLSHAV SEMSERYDEF CSNISLISFD EINRKQIESY Y
|
|---|
| |