Gene PC1_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1306 
Symbol 
ID8132244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1523254 
End bp1524105 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content31% 
IMG OID644864596 
Productglycosyl transferase family 2 
Protein accessionYP_003016889 
Protein GI253687699 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA AAGTAAGCGT CATTATCCCT GTGTATAATC ATGATAAATA CGTTGAAGAT 
GCTATAGAAA GTGTTTTTAA TCAGAGCTAT AAAAATATAG AAGTAATCGT ACTAAATGAT
GGTTCGACAG ATAATTCCCA TGAAGTGATT GTTGAGCTAA GAAAAAAATA TGATTTCATC
TATATTAATA AAAATAATGA AGGTCTTTCT AAGACGTTAC AGGAAGGCTT GAAGCTATGT
ACCGGTGATT TTATATCCCC TTTGGCTTCT GATGATATGT GGTTGGAAAA CAAAATAGAA
AAACAAGTCA ACTACATGAA CTTCAACAAT TCATGCGTTG CGTGCTGCGC TTATGTTAAT
ACTATTGACG AAAATAATCA TTTAACTTCA GTTGCGTTCC AAGATGATTT AGACAGTTTC
GATTTTGAAA GAATTATGTT CGAAGGGTAC AAAATACCTC CAGCTACAAT ATTAATTCGG
AGGCGTTGTT TAAGTGAACG CAATTATCGA GACGATTTAA AAGTTGAGGA TCTTTTTTTA
TGGTTAACGT TAACAAAAGA TAACGGAACC ATAGATATTC TTCCTTGCGT GTTGGCGAAT
TATAGGATTC ATAGTACCAA TACTACAGGT AACTTGGCGC TTATAGCAAA ATACCACCAT
ATGACTATTG ATTTTTTTAA AAATGAAAGT ATTTATAAAA AATCAAAAAA CGAATGGCGG
AAATTTTCTT TTAGGCAACT GTCAAGGGAC TATAAAAAAG AAGCTATTAA GTTGATATCG
ATAGATCCTT ATTTTCTTTT TAGTAAAGAA TACTTTATTG GGATGATTAA GATATTATTT
TTTTGGAAAT AG
 
Protein sequence
MDKKVSVIIP VYNHDKYVED AIESVFNQSY KNIEVIVLND GSTDNSHEVI VELRKKYDFI 
YINKNNEGLS KTLQEGLKLC TGDFISPLAS DDMWLENKIE KQVNYMNFNN SCVACCAYVN
TIDENNHLTS VAFQDDLDSF DFERIMFEGY KIPPATILIR RRCLSERNYR DDLKVEDLFL
WLTLTKDNGT IDILPCVLAN YRIHSTNTTG NLALIAKYHH MTIDFFKNES IYKKSKNEWR
KFSFRQLSRD YKKEAIKLIS IDPYFLFSKE YFIGMIKILF FWK