Gene PC1_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1298 
Symbol 
ID8132236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1514743 
End bp1516917 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content40% 
IMG OID644864588 
Producttyrosine kinase 
Protein accessionYP_003016881 
Protein GI253687691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.661567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AAATTTCAGT AAAAGCATCC GAAACCAATA CGGATGAGAT TGATTTAGGA 
CGTTTGTTGG GAACATTGCT GGATAATCGC TGGTTAATTA TTGGTGTTAC TGCAGTTTTC
ACAATTTTTG GTATTCTTTA TGCGACCTTT GCCACGCCGA TTTATAAAGC AGATGCACTC
ATTCAGGTGG AACAAAGTTC AGGTAACTCT TTGCTGAAAG ATATTTCCAG CGTGTTACCC
GATGCTAAAC CAGAATCGGC TGCTGAAATC GAGTTGATAA AGTCTCGTAT GGTTGTGGGT
AAGACTGTGA AGGATTTGTC GTTGGATATT GTTGTCCAAC AAAAGTACTT TCCGATTTTT
GGCAAAGGAT TCGCTCGTCT GATGGACGAT GAACCTGGAA AAATTGCTGT TTCACGGCTT
GAAGTTCCTC AATCTTGGCA AGAAAAGTTA ATTAAGTTAA CTGTTTTGGA TTTACAGACG
TATCAAGTCG AAGTCGGTGA TGTTGTAAAA TTTAAGGGCA AAGTTGGGCA AATAGAAAAA
CATGATGGAC TCTCTATATT GCTGAGTGAG ATTCAGGCTG AACCAGGAAT GGTATTCCGT
GTACAAAAGC TGAATACGCT TACGGCAATT AACAATGTCC TGGGTAATCT GTCTGTCGCC
GATAAAGGTA AAGATACTGG TGTGCTATCG TTGAGCTTTG AAGGTGAAGA GGCTGAGCTT
ACTAATAAAA TACTTAATAG TATTAGTCAA AATTACTTAC AGCAAAACGT TGAGCGTAAG
TCAGAAGAAG CAGGGAAGAG TCTGGAATTT TTGAAAGAGC AGCTTCCTAG TGTACGTTTA
AATTTGGATG ATGCAGATAA TAAGTTAAAT AGCTATCGTC AAAAAAATGA ATCTGTAGAT
TTGTCGTTAG AGGCAAAAGC AGTTTTGGAT ACGATGGTTG CAGTTGAATC TCAATTAAAT
GAATTAACTT TTAAAGAAGC TGAAATATCG AAACTTTATA CTAAGGAACA CCCAGCCTAC
CGTGCTTTGA TGGAAAAGCG TAAAACGTTA GAAGAAGAAC GTGAGAAAAT TAATAAACGA
GTAGGCGTTA TGCCTAAAAC CCAACAGGAA ATATTACGCT TAACGCGTGA TGTAAACGTT
GGGCAAGAAG TCTACATGCA GTTACTTAAT AAGCAGCAAG AGCTTAGTAT TAACAAAGCG
AGTACTGTAG GAAATGTTCG AATTATTGAC CCGTCTGCAA TTCAATTAAG CCCCGTAAAA
CCTAAAAAAG CACTTATTGT GCTACTGGCT ATCTTACTCG GTGGAATGGT ATCAACGGCA
TTTGTTGTAC TAAAAACTTT ATTACATAAA GGTATTGAAA GCCCTGAGCA GTTGGAGGAA
TTAGGGATCA ATGTTTATGC GAGTGTGCCA CTTTCTGAAT GGCAACAGAA AAAAGACAGA
GTGTTATTAG CAAGATCGAA TAAAAGTAAT ACACGGGCCA CTGAATTACT AGCGATTGGT
AACCCTACAG ATCTTGCTAT TGAAGCAATT AGAAGCCTCC GTACCAGTCT GCATTTTGCC
ATGATGGAAG CCAAAAATAA TGTACTGATG ATTTCTGGTG CTAGCCCGGC AATTGGTAAA
ACATTTATCA GTGCAAACCT TGGGGCTGTT ATTTCTCAAT CTGGTCAACG CGTTCTAATT
GTTGATTGTG ACATGCGTAA AGGCTACGCC CACGAGCTGA TGGGTACGCA GAGCGTTGAT
GGCTTGTCGG ATATTTTGTC TGGGCAGATA GAAGTAGAGA AAAGTATTCG GAAAACGGCA
CTGGAGAATA TGGATTTTAT TCCTCGCGGC CAAATTCCAC CTAATCCGTC CGAGCTTTTA
ATGCATAGTC GGTTCCCGCA ATTTATTAAG TGGGCTGCGG AGCATTACGA TATTGTATTA
TTAGATACAC CGCCGATACT CGCTGTAACG GATGCTGCTA TTATTAGCCG TCATGCAGGA
ACTTCTCTCT TAGTTGCACG CTTTGAAGTG AATACACTCA AAGAAATTGA AGTCAGTATT
CGTCGTTTTG AACAGAATGG TGCAGAAATA AAAGGCGTTA TTCTGAATGC TATTGTAAAA
CGTGCGGCAA GTTACTACGG GTATGGAAAC TATCACTACT ATACCTATGA CTATAAGTCA
GAAAAAAATA ATTAA
 
Protein sequence
MAEKISVKAS ETNTDEIDLG RLLGTLLDNR WLIIGVTAVF TIFGILYATF ATPIYKADAL 
IQVEQSSGNS LLKDISSVLP DAKPESAAEI ELIKSRMVVG KTVKDLSLDI VVQQKYFPIF
GKGFARLMDD EPGKIAVSRL EVPQSWQEKL IKLTVLDLQT YQVEVGDVVK FKGKVGQIEK
HDGLSILLSE IQAEPGMVFR VQKLNTLTAI NNVLGNLSVA DKGKDTGVLS LSFEGEEAEL
TNKILNSISQ NYLQQNVERK SEEAGKSLEF LKEQLPSVRL NLDDADNKLN SYRQKNESVD
LSLEAKAVLD TMVAVESQLN ELTFKEAEIS KLYTKEHPAY RALMEKRKTL EEEREKINKR
VGVMPKTQQE ILRLTRDVNV GQEVYMQLLN KQQELSINKA STVGNVRIID PSAIQLSPVK
PKKALIVLLA ILLGGMVSTA FVVLKTLLHK GIESPEQLEE LGINVYASVP LSEWQQKKDR
VLLARSNKSN TRATELLAIG NPTDLAIEAI RSLRTSLHFA MMEAKNNVLM ISGASPAIGK
TFISANLGAV ISQSGQRVLI VDCDMRKGYA HELMGTQSVD GLSDILSGQI EVEKSIRKTA
LENMDFIPRG QIPPNPSELL MHSRFPQFIK WAAEHYDIVL LDTPPILAVT DAAIISRHAG
TSLLVARFEV NTLKEIEVSI RRFEQNGAEI KGVILNAIVK RAASYYGYGN YHYYTYDYKS
EKNN