| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1297 |
|---|
| Symbol | |
|---|
| ID | 8132235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1514292 |
|---|
| End bp | 1514726 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644864587 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_003016880 |
|---|
| Protein GI | 253687690 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATT CAATACTTGT AGTTTGCGTA GGTAATATTT GCCGCTCCCC AACAGGGGAG
CGTTTACTAA AACAAGCATT GCCTACAAAG AAAATAGCGT CTGCAGGCCT AGGTGCTCTA
GTAGGAAAGC CTGCAGATGA GACCGCCACT GATGTTGCAA ATCAGCACAA TCTTTCTCTG
GATGGGCATG AGGCGCAGCA ATTAACGTCA GCATTATGTC GGCAATATGA CCTTATTCTG
GTTATGGAAA AAGGACATAT TGATGGCGTA TGTCGTATTG CGCCAGAAGT CCGAGGCAAG
ACAATGCTAT TTGGCCGCTG GCTTAATCAG CAAGAGATTG CTGATCCATA CCGCAAAAGT
CGTGAAGCAT TTGAATTCGT TTACTTGCAA CTTGAGCAGT CTGCCCAGAA ATGGGTGCAG
GCATTAAGCC GTTAA
|
|---|
| Protein sequence | MFDSILVVCV GNICRSPTGE RLLKQALPTK KIASAGLGAL VGKPADETAT DVANQHNLSL
DGHEAQQLTS ALCRQYDLIL VMEKGHIDGV CRIAPEVRGK TMLFGRWLNQ QEIADPYRKS
REAFEFVYLQ LEQSAQKWVQ ALSR
|
|---|
| |