| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1280 |
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| Symbol | |
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| ID | 8132218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1490811 |
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| End bp | 1491809 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864570 |
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| Product | 6-phosphogluconolactonase |
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| Protein accession | YP_003016863 |
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| Protein GI | 253687673 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.789478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCAAG TTGTTTATGT CGCCAGCCCG GAAAGCCAGC AGATCCACGT TTGGCAACTC
GGTGCTCAGG GTAATCTGAC ATTATTGCAA ACCGTTGATG TTCCAGGACA GGTTCAGCCG
ATGGTGATCG CACCGAACAA GCGCCACCTG TATGTCGGTG TTCGTCCTGA TTTCAGGGTT
CTGAGCTATC GTATTGATGA ACAGGGTAAA TTGACGGAGG CGGGTGTGGC GTCTTTACCG
GGCAGCCCGA CACACCTGTC TACCGATAAC GACGGACGTT TCCTGTTCAG CGCGTCTTAC
AGCGGCGCTT GTGTTAGCGT TAGCCCGATT GGTGCGGATG GCATCGTCGG CGAGCCGATT
CAGCAACTGG ACGGACTGGA AGGGTGCCAC TCTACCAATA TTGATCCAAC CAACCGCGTT
GTGTGGGCAC CGTGCCTGAA AGAAGACCGT ATCCGTCTGT ACGATCTGGG TGCGACGGGC
GAATTGAGCG TACACCGTCA GGCCGAAATG ACGACGGTAG CGGGGGCTGG TCCACGCCAT
ATGGCTTTCC ACCCCAATCA GCGTTTTGCC TATTGTGTGA ATGAACTGGA CAGTTCGGTA
GACGTGTATC AGTTGGATGC AGCCAGTGGT GAGTTGGAGA AAGTACAAAC GCTGGATGCC
ATGCCAGCGG GCTTCAATGA CACACGCTGG GCGGCAGATA TTCACATTAC GCCGAATGGC
CGTTTCCTGT ATATCAGCGA TCGTACTGCC AGCCTGTTGA GCATTTTCCA GGTGTCTGAA
GACGGCAGCG CGTTAACGCT GACCGGTCAT CAGCCGACTG AGACGCAGCC GCGCGGTTTC
AATATCGACA ACACCGGTGA GTTCCTGATT TCAGCAGGGC AGAAATCTCA GCACATTGAG
GTGTATCACA TCGATCAGAA CACGGGCGAT CTGCAACCGC TGGCGCGTTA CGCCGTCGGT
CAGGGGCCAA TGTGGGTGTC GGTGCTGGCG CTGGATTAG
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| Protein sequence | MQQVVYVASP ESQQIHVWQL GAQGNLTLLQ TVDVPGQVQP MVIAPNKRHL YVGVRPDFRV
LSYRIDEQGK LTEAGVASLP GSPTHLSTDN DGRFLFSASY SGACVSVSPI GADGIVGEPI
QQLDGLEGCH STNIDPTNRV VWAPCLKEDR IRLYDLGATG ELSVHRQAEM TTVAGAGPRH
MAFHPNQRFA YCVNELDSSV DVYQLDAASG ELEKVQTLDA MPAGFNDTRW AADIHITPNG
RFLYISDRTA SLLSIFQVSE DGSALTLTGH QPTETQPRGF NIDNTGEFLI SAGQKSQHIE
VYHIDQNTGD LQPLARYAVG QGPMWVSVLA LD
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