Gene PC1_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1267 
Symbol 
ID8132204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1477990 
End bp1478781 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID644864557 
ProductDNA-binding transcriptional regulator ModE 
Protein accessionYP_003016851 
Protein GI253687661 
COG category[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCTG AAATTCTTCT CACCCTGAAA CTCCAACAGC GTTTATTCGC CGACCCCCGG 
CGTATTGAAT TGCTCAAGCA AATTCGTCAT ACCGGCTCAA TCAGCCAGGG AGCTAAGCTG
GCGGGGATTA GCTATAAAAG CGCATGGGAT GCCATCAATG AGATGAACCA ACTAGCTGAG
CAGACTATCG TCGAACGTAT GACCGGCGGT AAAGGCGGCG GCGGCGCGCA GCTCACCCGC
TACGGCGAAC GCCTTCTCCA ACTGTACGAT TTGCTCGCGC AGATTCAGCA AAAAGCCTTT
GATGTCTTGC AGGAAGACGG GCTGCCGTTG GATAGCCTGC TGGCAGCTAT CGCGCGTTTC
TCACTGCAAA CCAGCGCACG CAACCAGTTT TTTGGAACCG TGCTCGCACG CGGTGAAGAA
CAGGTGCAAC AACATCTGGA TATTTTACTT GCCGATGGTA AAACAACGAT CAGCGCACTG
ATTACGCAGC AAAGCGCCGA ACGTCTGCAA TTACAGAAAG GAAAAGAGGT GCTTGCGCTG
ATTAAAGCAC CGTGGATCGA TGTGTACGCC GCCACATCCA CGGTGCCCAC CGTTGATAAC
GTCTTGCCCG GGCGAATTAA AGCCATTCAG CACGGTGTAG AAAACAGTGA AATTCTGATT
ACGCTGACAG GGGGAGAAAC CCTATGTGCG ATGGTGCCGA ATGCCTTACT TGAGCAGCAA
AAGTTGCAAC TGGGAACAGA CGTGAAGGCC TGTTTCAAGG CCGACAGGGT TATCATCGCC
ACGCTTTGCT AA
 
Protein sequence
MQAEILLTLK LQQRLFADPR RIELLKQIRH TGSISQGAKL AGISYKSAWD AINEMNQLAE 
QTIVERMTGG KGGGGAQLTR YGERLLQLYD LLAQIQQKAF DVLQEDGLPL DSLLAAIARF
SLQTSARNQF FGTVLARGEE QVQQHLDILL ADGKTTISAL ITQQSAERLQ LQKGKEVLAL
IKAPWIDVYA ATSTVPTVDN VLPGRIKAIQ HGVENSEILI TLTGGETLCA MVPNALLEQQ
KLQLGTDVKA CFKADRVIIA TLC