Gene PC1_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1257 
Symbol 
ID8132194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1465057 
End bp1466112 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content53% 
IMG OID644864547 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_003016841 
Protein GI253687651 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.129104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACC AAAATGATGA TTTAAGAATT AAAGAGATTA ATGAACTTTT GCCGCCGGTT 
GCTTTGCTAG AAAAGTTTCC AGCCACGGAG AAGGCAGCGG AAACGGTATC GTTCGCGCGT 
ACTGCCATCC ATAAAATTCT CAACGGCAAT GACGATCGCC TGCTGGTGGT GATCGGTCCT 
TGCTCGATCC ACGACACGAA AGCGGCAAAA GAGTACGCCG CGCGTTTGCT GACGCTGCGT 
GATGAACTGA GCGACGATCT GGAAGTGGTT ATGCGGGTTT ATTTTGAAAA ACCACGCACC 
ACGATTGGCT GGAAAGGGCT CATCAACGAT CCGCACATGG ACAATAGCTT CCAGATCAAC 
GATGGCCTGC GTATTGCGCG CCAGCTGCTG CTGGAAATTA ACGATACCGG TTTACCAGCG 
GCGGGTGAAT TTCTGGACAT GATCACCCCG CAATACCTGG CGGATTTGAT GAGCTGGGGC 
GCTATCGGCG CACGTACGAC AGAATCTCAG GTTCACCGTG AATTAGCGTC TGGCCTGTCA 
TGCCCTGTTG GCTTTAAAAA CGGCACCGAT GGCACCATCA AGGTCGCGAT TGATGCGATT 
AACGCCGCCA GCGCGCCACA CTGCTTCCTG TCTGTGACCA AATGGGGCCA TTCGGCTATC 
GTGAACACCA GCGGTAACAA CGATTGCCAC ATCATTCTGC GCGGCGGAAA AACGCCGAAC 
TATAGTGCTG AACACGTTAA AGACGTAAAG GTTGGCTTGG AAAAAGCGGG TCTGACACCG 
CAGGTCATGA TCGATTTCAG CCATGCGAAC AGCAGCAAGC AGTTCAAAAA GCAGATGGAT 
GTCTGTACTG ACGTCAGTGG GCAGATCGCT CAGGGCGACA AAGCGATTAT GGGCGTGATG 
GTAGAAAGCC ATCTGGTTGA AGGCAACCAA AGTCTGGAAA GCGGTGAGCC GCTGGTTTAT 
GGCCGCAGTG TGACTGACGC GTGTATTGGC TGGGAAGACA CGGAATCCCT GCTGCGCCAG 
TTAGCGTCTG CAGTACGCGA ACGCCGCAGC AAGTAA
 
Protein sequence
MNYQNDDLRI KEINELLPPV ALLEKFPATE KAAETVSFAR TAIHKILNGN DDRLLVVIGP 
CSIHDTKAAK EYAARLLTLR DELSDDLEVV MRVYFEKPRT TIGWKGLIND PHMDNSFQIN 
DGLRIARQLL LEINDTGLPA AGEFLDMITP QYLADLMSWG AIGARTTESQ VHRELASGLS 
CPVGFKNGTD GTIKVAIDAI NAASAPHCFL SVTKWGHSAI VNTSGNNDCH IILRGGKTPN 
YSAEHVKDVK VGLEKAGLTP QVMIDFSHAN SSKQFKKQMD VCTDVSGQIA QGDKAIMGVM 
VESHLVEGNQ SLESGEPLVY GRSVTDACIG WEDTESLLRQ LASAVRERRS K