Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1251 |
Symbol | |
ID | 8132186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1459038 |
End bp | 1459814 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864539 |
Product | tol-pal system protein YbgF |
Protein accession | YP_003016835 |
Protein GI | 253687645 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000656344 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTA ACTTCAGACG TCACCTGTTG GGTCTGTCGT TACTGGTTGG CGTAGCGGTC CCTTGGGCCG CTACTGCCCA AGCGCCAATC AGTAATGTCG GCTCAGGCTC GGTCGAAGAC CGTGTCACTC AATTGGAGCG TATTTCTAAC GCTCACAGTC AGCTTTTAAC CCAACTTCAG CAGCAGCTCT CTGATAATCA GCGTGATATT GACAGCCTCC GTGGGCAGAT TCAGGAAAGT CAGTATCAGT TGAATCAGGT TGTTGAACGG CAGAAGCAGA TCTATCAGCA GATTGATGGA TTAAGTTCGC AATCATCTTC TACACCGACG ACAGATGGCA CACCTGCCGC TGCTGCGGGT ACTGACACCG GTGCGGCCAA TACGGCGGCA CCGGCCAGTA CGGGTGATGC GAATACTGAT TACAATGCTG CAGTCGCGCT CGTGCTGGAG AAAAAACAGT ACGATCAGGC GATCAGCGCA TTTCAGGCAT TCGTCAAGAA GTACCCCGAT TCAACGTATC AACCTAATGC TAACTATTGG CTTGGTCAGT TGAATTACAA CAAGGGGAAA AAGGACGATG CGGCGTACTA TTTCGCCAAC GTTGTTAAAA ATTATCCCAA GTCACCAAAA AGTTCCGAAG CCTTGCTGAA GGTTGGGGTG ATCATGCAGG AAAAAGGTCA GGCAGATAAA GCCAAGGCCG TTTACCAGCA AGTTGTAAAA ATGTACCCCA ATACAGAAAG TGCAAAGCAG GCGCAAAAGC GTTTAGCCGG ATCGTAA
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Protein sequence | MSSNFRRHLL GLSLLVGVAV PWAATAQAPI SNVGSGSVED RVTQLERISN AHSQLLTQLQ QQLSDNQRDI DSLRGQIQES QYQLNQVVER QKQIYQQIDG LSSQSSSTPT TDGTPAAAAG TDTGAANTAA PASTGDANTD YNAAVALVLE KKQYDQAISA FQAFVKKYPD STYQPNANYW LGQLNYNKGK KDDAAYYFAN VVKNYPKSPK SSEALLKVGV IMQEKGQADK AKAVYQQVVK MYPNTESAKQ AQKRLAGS
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