Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1250 |
Symbol | |
ID | 8132185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1458519 |
End bp | 1459028 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864538 |
Product | peptidoglycan-associated outer membrane lipoprotein |
Protein accession | YP_003016834 |
Protein GI | 253687644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000441417 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCA ATAAAGTGCT GAAAGGCCTG ATGTTGGCTC TGCCGGTACT GGCAGTGGCC GCTTGTAGCT CCAACAAGAA TGCGGACAAT GACCAATCTT CCATGGGTGC TGGCAACAAC GGCATGATGG ACGGCGGCAA CATGTCTTCT TCTGAGCAAG CTCGTTTGCA GATGCAAGAA TTACAGCGCA ACAACATCGT TTACTTCGGT CTGGATAAGT ACGATGTGAG CTCTGAATTC GCTCAGATGC TGGACGCACA CGCTGCATTC CTGCGTAGCA ACCCGTCTTA CAAAGTGACT ATCGAAGGTC ACGCGGACGA ACGCGGTACG CCAGAATACA ACATCGCTCT GGGTGAGCGT CGTGCCAACG CGGTACAAAT GTACCTGCAA GGTAAAGGCG TTTCTTCCGA TCAGATCTCT ATCGTTTCTT ACGGTAAAGA GAAACCAGCT GTTCTCGGTC ATGACGAAGC GGCATATGCC AAAAACCGTC GTGCCGTTCT GGTATATTAA
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Protein sequence | MQFNKVLKGL MLALPVLAVA ACSSNKNADN DQSSMGAGNN GMMDGGNMSS SEQARLQMQE LQRNNIVYFG LDKYDVSSEF AQMLDAHAAF LRSNPSYKVT IEGHADERGT PEYNIALGER RANAVQMYLQ GKGVSSDQIS IVSYGKEKPA VLGHDEAAYA KNRRAVLVY
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