Gene PC1_1245 details

Gene Information

• Locus tag: PC1_1245
• ID: 8132180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1454270
• End bp: 1454674
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644864533
• Product: acyl-CoA thioester hydrolase YbgC
• Protein accession: YP_003016829
• Protein GI: 253687639
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0111113
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAATT CGTTGTTTCG CTGGCCAGTT CGAGTCTACT TTGAAGACAC TGATGCAGGT 
GGCGTTGTCT ACCATGCGCG CTATGTTGCC TTTTATGAAA GGGCAAGAAC CGAGGCGTTG 
CGTGAGCGCA ACTTTCACCA GCAAGCCTTG CTAAGTGAGC ATGTCGCGTT TGCTGTTCGT 
CGGATGACGG TGGAGTATCT TGCTCCTGCT CGCCTTGACG ACATGCTGGA AGTGCAAAGT 
GAGATTATCT CGCTGCGTGG CGCTTCTCTG ACTTTCGCAC AGCGTATTCT CAATGCTCAT 
AGCACCCTGC TAAGCCATGC TGAAGTTTTG ATCGCATGCA TCGATCCACA TCAAATGAAG 
CCAATTGCGC TTCCTAAGTC TATTGTCGCG GAGTTCAAGC AGTGA 

 

Protein sequence

MSNSLFRWPV RVYFEDTDAG GVVYHARYVA FYERARTEAL RERNFHQQAL LSEHVAFAVR 
RMTVEYLAPA RLDDMLEVQS EIISLRGASL TFAQRILNAH STLLSHAEVL IACIDPHQMK 
PIALPKSIVA EFKQ