| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1242 |
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| Symbol | |
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| ID | 8132177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1452574 |
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| End bp | 1453713 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864530 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_003016826 |
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| Protein GI | 253687636 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.166295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAT ATGAAGTCTT ACGTTTTATC TGGTGGCTGT TGATCGGTAT TTTGCTGATT
GGCTTCGCTA TCACTGATGG TTTTGACATG GGCGTGGGCA TTCTGGTGCG TCTGATGGGA
CGTGGCGATA CCGAGCGTCG TGTCATGATT AACAGTATTG CGCCGCACTG GGACGGTAAC
CAGGTCTGGT TGATCACCGC AGGTGGCGCG CTGTTTGCTG CCTGGCCGAT GGTTTACGCG
GCTGCGTTCT CCGGTTTCTA CATTGCCATG ATTCTGGTGC TGGCCTCATT GTTCTTCCGT
CCTGTCGGCT TCGATTACCG TTCAAAAATC GAAGACCCAC GCTGGCGTGG CATGTGGGAC
TGGGGCATCT TCATCGGTAG CTTTGTTCCG CCAGTTGTTA TTGGCGTTGC GTTTGGCAAC
CTGTTGCAGG GTGTGCCGTT CCACGTCGAT GAATATCTGC GTCTGTACTA CACCGGAAAC
TTCTTCCAGC TGCTGAATCC GTTTGGTCTG TTGGCTGGTG TGGTGAGTCT GACGATGATT
CTTGCTCAGG GTGCAACCTA CCTGATGATG CGGACCACGG GCGATCTGCA CGTGCGCTCC
AAATCTGCTG CGCAGATTTC CGCGCTGGTA ATGATGGTGG CATTTGCTCT GGCAGGCGTA
TGGGTTGTTT ACGGTATTGA TGGTTATGTC GTGACGTCTG CGATTAACAC TGCCGCTGAA
TCTAACCCGC TGCGTAAAGA AGTCGTTCAT CAGGCGGGTG CCTGGCTGAT TAACTTCAAT
AATCATCCGA TCTTGTGGGC GATTCCTGCT CTGGGCGTAG TATTGCCGGT GCTGACTACT
CTTATGGCGC GCGCAGAGAA AGGTGCATGG GCATTCCTGT TCTCTTCTTT GACGATCGCT
TGTGTGATTC TGACTGCTGG GATTGCCATG TTCCCGTTCA TCATGCCGTC AGTTACCGTG
CCTAACGTCA GCTTGACGAT ATGGGACGCG ACGTCGAGCC TGCTGACGCT GAAAGTGATG
ACAGTGGTTG CGATTATTTT CGTACCTATC GTGCTTTCTT ATACCGCATG GTGTTACTAC
AAGATGTTCG GTCGCATTAC CAAAGAGCAG ATTGAGCAAA ACACTCACTC TATGTACTAA
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| Protein sequence | MFEYEVLRFI WWLLIGILLI GFAITDGFDM GVGILVRLMG RGDTERRVMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYA AAFSGFYIAM ILVLASLFFR PVGFDYRSKI EDPRWRGMWD
WGIFIGSFVP PVVIGVAFGN LLQGVPFHVD EYLRLYYTGN FFQLLNPFGL LAGVVSLTMI
LAQGATYLMM RTTGDLHVRS KSAAQISALV MMVAFALAGV WVVYGIDGYV VTSAINTAAE
SNPLRKEVVH QAGAWLINFN NHPILWAIPA LGVVLPVLTT LMARAEKGAW AFLFSSLTIA
CVILTAGIAM FPFIMPSVTV PNVSLTIWDA TSSLLTLKVM TVVAIIFVPI VLSYTAWCYY
KMFGRITKEQ IEQNTHSMY
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