Gene PC1_1238 details

Gene Information

• Locus tag: PC1_1238
• Symbol: sucC
• ID: 8132173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1446831
• End bp: 1447997
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644864526
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_003016822
• Protein GI: 253687632
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.988188
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAC ACGAGTATCA GGCAAAACAA CTCTTTGCTC GATATGGTTT ACCGGCACCG 
ACCGGCTATG CCTGTACCAC ACCGCGTGAA GCGGAAGAAG CCGCGTCTAA AATTGGTGCG 
GGTCCGTGGG TCGTAAAATG TCAGGTTCAC GCAGGCGGTC GCGGTAAAGC GGGCGGCGTT 
AAAGTCGTCA GTAACAAAGA AGATATCCGC GCCTTTGCTG AAAACTGGTT AGGTAAAAAA 
CTCGTTACTT ATCAAACTGA CGCACAGGGC CAACCGGTTC ATCAAATCCT GGTTGAAGCG 
GCAACAGATA TCGACAAAGA GCTTTATCTG GGCGCAGTTG TTGACCGTGG CACGCGTCGC 
GTGGTGTTCA TGGCATCCAC CGAAGGTGGT GTAGAAATTG AAAAAGTGGC GGAAGAGACG 
CCAGAACTGA TTCATAAAGC AGCGATCGAT CCGCTGGTAG GGCCACAGCC TTATCAGGGA 
CGCGAGTTGG CCTTCAAACT GGGCCTGAGC GGCAAGCAAG TGGCACAGTT CACCAAAATC 
TTTATGGGTC TGGCGACGCT GTTCCTGGAG CGCGATCTGG CGCTGGTAGA AATTAACCCG 
CTGGTTATCA CCAAGCAGGG CGATTTGGTG TGTCTGGATG GCAAACTCGG CGCGGACGGC 
AATGCGCTGT TCCGCCAGCC TGAGCTGCGC GAAATGCGTG ACCCAAGTCA GGAAGATTCC 
CGTGAAGCAC ATGCGGCACA GTGGGAACTG AACTATGTTG CGCTGGACGG CAATATTGGC 
TGTATGGTGA ACGGTGCTGG CCTGGCGATG GGCACGATGG ACATCGTGAA GCTGCACGGC 
GGTTCTCCTG CAAACTTCCT CGACGTTGGC GGCGGCGCGA CGAAAGAACG TGTTACCGAA 
GCGTTCAAAA TTATCCTGTC TGATGACAAG GTAAAAGCTG TCTTTGTTAA CATCTTTGGC 
GGCATTGTAC GTTGCGATTT GATCGCTGAC GGCATCATCG GCGCGGTAGC CGAAGTGGGT 
GTTAACGTAC CGGTTGTTGT GCGTTTGGAA GGAAACAATG CGGAGCTGGG TGCCAAGAAA 
CTGGCGGATA GCGGCCTGAA TATTATCGCC GCGACCAGCC TGACGGGTGC CGCTCAGCAG 
GTTGTTGCAG CTGTGGAGGG TAAATAA 

 

Protein sequence

MNLHEYQAKQ LFARYGLPAP TGYACTTPRE AEEAASKIGA GPWVVKCQVH AGGRGKAGGV 
KVVSNKEDIR AFAENWLGKK LVTYQTDAQG QPVHQILVEA ATDIDKELYL GAVVDRGTRR 
VVFMASTEGG VEIEKVAEET PELIHKAAID PLVGPQPYQG RELAFKLGLS GKQVAQFTKI 
FMGLATLFLE RDLALVEINP LVITKQGDLV CLDGKLGADG NALFRQPELR EMRDPSQEDS 
REAHAAQWEL NYVALDGNIG CMVNGAGLAM GTMDIVKLHG GSPANFLDVG GGATKERVTE 
AFKIILSDDK VKAVFVNIFG GIVRCDLIAD GIIGAVAEVG VNVPVVVRLE GNNAELGAKK 
LADSGLNIIA ATSLTGAAQQ VVAAVEGK