Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1213 |
Symbol | |
ID | 8132148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1416490 |
End bp | 1416918 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864501 |
Product | hypothetical protein |
Protein accession | YP_003016797 |
Protein GI | 253687607 |
COG category | [S] Function unknown |
COG ID | [COG2510] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00065013 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTT GGTTAATTTA CGCTTTGCTG TCTGCTGTAT GCGCCGCGCT GGTCGCGATA TTTGGCAAGA TTGGTCTGCA AAACTTGGAC GCCAATACGG CGACCGCAAT TCGTGCCGTC ATCATGGCAC TTTTTCTGGT AGGGGTGGTG GTCGCACAAG GCAAACTGGT ACTGGTCGGC GAGATTATTG CCAATAAGAA AGCGCTGTTG TTCATTGTAC TCAGCGGCGT CGCGGGTGCG CTGTCGTGGC TGTTTTACTT TGTCGCATTG AAAAACGGTA ACGTCGCACA GGTTGCTCCG ATCGATAAGC TCAGTGTGGT GTTCGCTGTC GTGCTGGCGG TTATCCTGCT GGGAGAAAAG ATTTCGCTGA TGGCGGGCGT CGGTGTTGCG CTGATTTCAG CAGGTGCGCT ACTTGTCGCG TTGGGATAA
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Protein sequence | MSSWLIYALL SAVCAALVAI FGKIGLQNLD ANTATAIRAV IMALFLVGVV VAQGKLVLVG EIIANKKALL FIVLSGVAGA LSWLFYFVAL KNGNVAQVAP IDKLSVVFAV VLAVILLGEK ISLMAGVGVA LISAGALLVA LG
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