Gene PC1_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1213 
Symbol 
ID8132148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1416490 
End bp1416918 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content53% 
IMG OID644864501 
Producthypothetical protein 
Protein accessionYP_003016797 
Protein GI253687607 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00065013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTT GGTTAATTTA CGCTTTGCTG TCTGCTGTAT GCGCCGCGCT GGTCGCGATA 
TTTGGCAAGA TTGGTCTGCA AAACTTGGAC GCCAATACGG CGACCGCAAT TCGTGCCGTC
ATCATGGCAC TTTTTCTGGT AGGGGTGGTG GTCGCACAAG GCAAACTGGT ACTGGTCGGC
GAGATTATTG CCAATAAGAA AGCGCTGTTG TTCATTGTAC TCAGCGGCGT CGCGGGTGCG
CTGTCGTGGC TGTTTTACTT TGTCGCATTG AAAAACGGTA ACGTCGCACA GGTTGCTCCG
ATCGATAAGC TCAGTGTGGT GTTCGCTGTC GTGCTGGCGG TTATCCTGCT GGGAGAAAAG
ATTTCGCTGA TGGCGGGCGT CGGTGTTGCG CTGATTTCAG CAGGTGCGCT ACTTGTCGCG
TTGGGATAA
 
Protein sequence
MSSWLIYALL SAVCAALVAI FGKIGLQNLD ANTATAIRAV IMALFLVGVV VAQGKLVLVG 
EIIANKKALL FIVLSGVAGA LSWLFYFVAL KNGNVAQVAP IDKLSVVFAV VLAVILLGEK
ISLMAGVGVA LISAGALLVA LG