Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1211 |
Symbol | |
ID | 8132146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1414032 |
End bp | 1414568 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864499 |
Product | replication initiation regulator SeqA |
Protein accession | YP_003016795 |
Protein GI | 253687605 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000726719 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTA TTGAAGTCGA CGAAGAGCTT TATCGTTATA TTGCCAGCCA CACACAACAT ATCGGTGAAA GCGCATCGGA TATTTTACGG CGTATGCTGA AATTTACCGC TGGGCAACCT GTGGTCACGC CTGCCGTAGA GGCTGTCACA ACGGCGACAT CTCAGCCTGC CGCGGCGCCG AGCCCGCGCG ATCGAGTACG AACCCTGCGT GAGCTGCTGC TGTCGGATGA ATACGCTGAA CAGAATAAGG CCATCAATCG CTTTATGCTG GTTCTGTCCA CGCTGTATAC CTTATCGCCG CAGGAGTTTG CTGCCGCGAC AGAATCTCTT CATGGCCGCA CGCGGGTCTA TTTCGCGGGC GACCAACAAA CGTTGCTTCA GCATGGCACA CACACAAAAC CCAAACATAT TCCGGGTACG CCATACTGGG TGATTACCAA CACGAATACC GGTCGTAAAC GTAGCATGGT TGAGCACATC ATGCTGACGA TGCAGTTCCC TGCGGAACTG ACAGAGAAAG TGTGCGGAAC CATCTAA
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Protein sequence | MKTIEVDEEL YRYIASHTQH IGESASDILR RMLKFTAGQP VVTPAVEAVT TATSQPAAAP SPRDRVRTLR ELLLSDEYAE QNKAINRFML VLSTLYTLSP QEFAAATESL HGRTRVYFAG DQQTLLQHGT HTKPKHIPGT PYWVITNTNT GRKRSMVEHI MLTMQFPAEL TEKVCGTI
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