Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1210 |
Symbol | |
ID | 8132145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1412866 |
End bp | 1413645 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864498 |
Product | hypothetical protein |
Protein accession | YP_003016794 |
Protein GI | 253687604 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000115762 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTCA CCATGAAATT GAATCATCGC TGGCAAAATG CGCACCAACC CACAGATAAA CTCCCTGTCG TCCTGATTCA TGGCCTGTTT GGCACGCTGG ATAACCTTGG CGTATTGGGC CGGGACTTGC AAAACACGCA CGACATCCTG CAAATAGATT TACGCAATCA TGGTTTGTCG CCGCGCTCAC CGCAGATGAA CTATCCCGCG ATGGCGCAGG ACGTGCTGGC GCTGCTGGAT GAACTGAACA TCGAACGCGC TATTGTTATT GGCCATTCAA TGGGCGGGAA AGTCGCTATG GCGCTCAGCG CGCTCATTCC TGAACGACTG GACAAACTGG TCGCGATCGA CATCGCACCG GTGGATTATC AGGTGCGCCG CCACGACACC ATTTTTGCCG CACTACGCGC CGTGACGGAA GCGGGCCTGA CATCGCGCTC GGAAGCCACG ACATTAATGC GTCAGCATAT AAAGGAAGAA GGCGTGATTC AGTTTTTGCT GAAATCGTTC CAACAGGGAG AGTGGCGTTT TAACGTACCG GTATTGTGGG ATGAGTACGA AAACATCGTG GGTTGGCAGG ATGTTCCCAC CTGGCAAGGC CCTATCCTGT TTATTCGCGG CGGCGATTCC CCCTATCTGG ACGATCGCTA CCGCGATTCG CTATTGCGTC AATTCCCGGC AGCGCGTGCG CATGTGGTCA GCGGAGCGGG TCACTGGGTT CACTCAGAAA AGCCCGAAGC AGTTTTGCGC GCTATCCACC GTTTTCTGGA CACGAATTAA
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Protein sequence | MNFTMKLNHR WQNAHQPTDK LPVVLIHGLF GTLDNLGVLG RDLQNTHDIL QIDLRNHGLS PRSPQMNYPA MAQDVLALLD ELNIERAIVI GHSMGGKVAM ALSALIPERL DKLVAIDIAP VDYQVRRHDT IFAALRAVTE AGLTSRSEAT TLMRQHIKEE GVIQFLLKSF QQGEWRFNVP VLWDEYENIV GWQDVPTWQG PILFIRGGDS PYLDDRYRDS LLRQFPAARA HVVSGAGHWV HSEKPEAVLR AIHRFLDTN
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