Gene PC1_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1205 
Symbol 
ID8132140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1406561 
End bp1408219 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content51% 
IMG OID644864493 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_003016789 
Protein GI253687599 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00285651 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGG CTGAAGCCCG CCCAACCAAC TTTATCCGTC AGATTATCGA TGAAGATCTG 
GCGTCCGGTA AGCATGACCA TATTCAGACG CGTTTCCCGC CAGAGCCGAA CGGCTATCTG
CATATTGGAC ATGCCAAGTC TATTTGCCTG AATTTTGGTA TTGCGCGTGA CTATCAGGGG
CAATGCAACC TGCGTTTTGA CGACACCAAT CCGGTAAAAG AAGATATCGA ATACGTTGAG
TCGATCAAAC GTGACGTCGA GTGGCTGGGC TTTTCATGGA GCGGCGATGT TCGCTATTCT
TCTGATTATT TCGATCAACT TCACGCGTAT GCGGTTGAGC TGATCGGTAA AGGATTGGCT
TACGTTGATG AACTGACGCC TGAGCAGATC CGTGAATACC GCGGTACGCT GACGGCACCG
GGTAAAAATA GCCCTTACCG CGATCGTACC GTGCAGGAAA ACCTGGCGCT GTTTGAAAAA
ATGCGTAACG GTGGATTTGC GGAAGGTACT GCCTGCCTGC GTGCAAAAAT CGATATGGCA
TCGTCCTTTA TCGTGATGCG CGATCCGGTG CTGTATCGTA TTAAATTTGC CGATCACCAC
CAGACGGGCA ACAAGTGGTG CATCTACCCG ATGTATGATT TCACCCACTG CATTTCCGAT
GCGCTGGAAG GGATCACGCA TTCGCTGTGT ACGCTGGAAT TCCAGGATAA CCGCCGCCTG
TATGACTGGG TGTTGGATAA CATCACCATT CCTTGCCATC CGCGTCAGTA CGAATTCTCT
CGCCTCAACC TCGAATACGC AATTATGTCC AAGCGTAAGC TGAATCAGTT GGTGGTGGAA
AATGTCGTTG AAGGATGGGA CGATCCGCGT ATGCCGACCA TTTCTGGTCT GCGTCGTCGC
GGTTATAGTG CGTCTTCTAT CCGTGAGTTC TGTGTGCGTA TCGGCGTTAC GAAGCAGGAT
AACAATGTGG AAATGGCCGC GCTTGAATCC TGTATCCGCG ACGATCTGAA TGAGAACGCT
CCGCGTGCGA TGGCGGTGTT GGACCCGGTA AAAGTCGTGA TCGAGAATCT GCCCGCCGGG
CATGAAGAGT TTGTTGCGAT GCCAAACCAC CCGAACAAAC CTGAAATGGG TTCACGTCAG
GTGGCATTCA GCCGTGAAGT CTATATCGAC CGTGCTGACT TCCGTGAAGA AGCTAATAAA
CAGTACAAAC GCTTGGTGTT GGGTAAAGAG GTTCGTCTGC GTAATGCCTA TGTGATCAAA
GCGGATCGCA TTGAGAAAGA CGAGCAGGGC ACCATCACCA CGATCTACTG TAGCTATGAT
GCAGAGACGC TGAGCAAGGA TCCGGCTGAC GGCCGTAAAG TGAAAGGTGT GATCCACTGG
GTTTCTGCGG CACACGCTGT ACCTGCGGAA TTCCGTTTGT ACGATCGTCT GTTCAGTGTG
GCAAACCCTG GCGCGGCAGA AGACTTCCTG TCGACGATTA ACCCTGACTC ACTGAAGATT
ACGCAAGGTT TTGTCGAAGC GAGCCTGGCG CAAGCAGAAG CAGAGAAAGC GTATCAGTTT
GAGCGTGAAG GTTACTTCTG TGCCGATCGC GTTTACTCCA GTGCAGAGCA TCTGGTGTTT
AACCGTACGG TTGGACTGCG CGATACTTGG GTGGGCTAA
 
Protein sequence
MSEAEARPTN FIRQIIDEDL ASGKHDHIQT RFPPEPNGYL HIGHAKSICL NFGIARDYQG 
QCNLRFDDTN PVKEDIEYVE SIKRDVEWLG FSWSGDVRYS SDYFDQLHAY AVELIGKGLA
YVDELTPEQI REYRGTLTAP GKNSPYRDRT VQENLALFEK MRNGGFAEGT ACLRAKIDMA
SSFIVMRDPV LYRIKFADHH QTGNKWCIYP MYDFTHCISD ALEGITHSLC TLEFQDNRRL
YDWVLDNITI PCHPRQYEFS RLNLEYAIMS KRKLNQLVVE NVVEGWDDPR MPTISGLRRR
GYSASSIREF CVRIGVTKQD NNVEMAALES CIRDDLNENA PRAMAVLDPV KVVIENLPAG
HEEFVAMPNH PNKPEMGSRQ VAFSREVYID RADFREEANK QYKRLVLGKE VRLRNAYVIK
ADRIEKDEQG TITTIYCSYD AETLSKDPAD GRKVKGVIHW VSAAHAVPAE FRLYDRLFSV
ANPGAAEDFL STINPDSLKI TQGFVEASLA QAEAEKAYQF EREGYFCADR VYSSAEHLVF
NRTVGLRDTW VG