Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1205 |
Symbol | |
ID | 8132140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1406561 |
End bp | 1408219 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864493 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_003016789 |
Protein GI | 253687599 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00285651 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGG CTGAAGCCCG CCCAACCAAC TTTATCCGTC AGATTATCGA TGAAGATCTG GCGTCCGGTA AGCATGACCA TATTCAGACG CGTTTCCCGC CAGAGCCGAA CGGCTATCTG CATATTGGAC ATGCCAAGTC TATTTGCCTG AATTTTGGTA TTGCGCGTGA CTATCAGGGG CAATGCAACC TGCGTTTTGA CGACACCAAT CCGGTAAAAG AAGATATCGA ATACGTTGAG TCGATCAAAC GTGACGTCGA GTGGCTGGGC TTTTCATGGA GCGGCGATGT TCGCTATTCT TCTGATTATT TCGATCAACT TCACGCGTAT GCGGTTGAGC TGATCGGTAA AGGATTGGCT TACGTTGATG AACTGACGCC TGAGCAGATC CGTGAATACC GCGGTACGCT GACGGCACCG GGTAAAAATA GCCCTTACCG CGATCGTACC GTGCAGGAAA ACCTGGCGCT GTTTGAAAAA ATGCGTAACG GTGGATTTGC GGAAGGTACT GCCTGCCTGC GTGCAAAAAT CGATATGGCA TCGTCCTTTA TCGTGATGCG CGATCCGGTG CTGTATCGTA TTAAATTTGC CGATCACCAC CAGACGGGCA ACAAGTGGTG CATCTACCCG ATGTATGATT TCACCCACTG CATTTCCGAT GCGCTGGAAG GGATCACGCA TTCGCTGTGT ACGCTGGAAT TCCAGGATAA CCGCCGCCTG TATGACTGGG TGTTGGATAA CATCACCATT CCTTGCCATC CGCGTCAGTA CGAATTCTCT CGCCTCAACC TCGAATACGC AATTATGTCC AAGCGTAAGC TGAATCAGTT GGTGGTGGAA AATGTCGTTG AAGGATGGGA CGATCCGCGT ATGCCGACCA TTTCTGGTCT GCGTCGTCGC GGTTATAGTG CGTCTTCTAT CCGTGAGTTC TGTGTGCGTA TCGGCGTTAC GAAGCAGGAT AACAATGTGG AAATGGCCGC GCTTGAATCC TGTATCCGCG ACGATCTGAA TGAGAACGCT CCGCGTGCGA TGGCGGTGTT GGACCCGGTA AAAGTCGTGA TCGAGAATCT GCCCGCCGGG CATGAAGAGT TTGTTGCGAT GCCAAACCAC CCGAACAAAC CTGAAATGGG TTCACGTCAG GTGGCATTCA GCCGTGAAGT CTATATCGAC CGTGCTGACT TCCGTGAAGA AGCTAATAAA CAGTACAAAC GCTTGGTGTT GGGTAAAGAG GTTCGTCTGC GTAATGCCTA TGTGATCAAA GCGGATCGCA TTGAGAAAGA CGAGCAGGGC ACCATCACCA CGATCTACTG TAGCTATGAT GCAGAGACGC TGAGCAAGGA TCCGGCTGAC GGCCGTAAAG TGAAAGGTGT GATCCACTGG GTTTCTGCGG CACACGCTGT ACCTGCGGAA TTCCGTTTGT ACGATCGTCT GTTCAGTGTG GCAAACCCTG GCGCGGCAGA AGACTTCCTG TCGACGATTA ACCCTGACTC ACTGAAGATT ACGCAAGGTT TTGTCGAAGC GAGCCTGGCG CAAGCAGAAG CAGAGAAAGC GTATCAGTTT GAGCGTGAAG GTTACTTCTG TGCCGATCGC GTTTACTCCA GTGCAGAGCA TCTGGTGTTT AACCGTACGG TTGGACTGCG CGATACTTGG GTGGGCTAA
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Protein sequence | MSEAEARPTN FIRQIIDEDL ASGKHDHIQT RFPPEPNGYL HIGHAKSICL NFGIARDYQG QCNLRFDDTN PVKEDIEYVE SIKRDVEWLG FSWSGDVRYS SDYFDQLHAY AVELIGKGLA YVDELTPEQI REYRGTLTAP GKNSPYRDRT VQENLALFEK MRNGGFAEGT ACLRAKIDMA SSFIVMRDPV LYRIKFADHH QTGNKWCIYP MYDFTHCISD ALEGITHSLC TLEFQDNRRL YDWVLDNITI PCHPRQYEFS RLNLEYAIMS KRKLNQLVVE NVVEGWDDPR MPTISGLRRR GYSASSIREF CVRIGVTKQD NNVEMAALES CIRDDLNENA PRAMAVLDPV KVVIENLPAG HEEFVAMPNH PNKPEMGSRQ VAFSREVYID RADFREEANK QYKRLVLGKE VRLRNAYVIK ADRIEKDEQG TITTIYCSYD AETLSKDPAD GRKVKGVIHW VSAAHAVPAE FRLYDRLFSV ANPGAAEDFL STINPDSLKI TQGFVEASLA QAEAEKAYQF EREGYFCADR VYSSAEHLVF NRTVGLRDTW VG
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