Gene PC1_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1204 
Symbol 
ID8132139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1404890 
End bp1406386 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content54% 
IMG OID644864492 
ProductPTS system, N-acetylglucosamine-specific IIBC subunit 
Protein accessionYP_003016788 
Protein GI253687598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.194888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACTC TGAGCTATTT ACAAAAAGTC GGCCGGGCAC TGATGGTGCC TGTCGCGACG 
CTGCCTGCTG CCGCCATCCT GATGGGGATA GGTTACTGGA TTGATCCAGT TGGCTGGGGA
AGCGAGAACG CATTAGCGGC ACTTCTCATC AAATCGGGCG AGGCGATTAT CGGGCATATG
GCAGTGCTGT TTGCGGTCGG TGTCGCTTAC GGCATGTCGA AAGATAAGGA TGGTGCGGCA
GCATTGACCG GCTTTGTCGG CTATCTGGTG CTGACCACGC TGTGTTCACC GGCCGTTGTC
GCCATGATCC AACGGATCCC GGTTGAACAG GTGCCTGCGG CGTTTGGCAA GATTGAAAAC
CAGTTCATCG GAATTCTGGT CGGTGTGATG TCCGCCGAAC TGTATAACCG CTTTAGTCAG
GTTGAACTGC CTAAGGCGTT GTCGTTCTTC AGCGGACGCC GTTTGGTCCC AATTTTGGTT
TCTTTCCTGA TGATCCTGGT GGCGTTCATT TTAATGTACG TCTGGCCGGT GATTTACAAT
GCGCTGGTGT CGTTTGGCGA ACACATCCAA CAGCTGGGCT CGGTAGGTGC CGGGGTTTAT
GCCTTCTTTA ACCGCTTGCT GATTCCTGTT GGGCTGCACC ACGCGCTGAA CTCCGTGTTC
TGGTTTGATG TTGCGGGTAT CAACGATATC CCTAACTTCC TGGCTGGCCA GCAGTCTATT
GATTCAGGCA AAGCCGTTGT GGGGATCACC GGACGTTATC AGGCGGGCTT CTTCCCGATT
ATGATGTTCG GACTGCCGGG TGCGGCGCTG GCGATTTATC ACTGTGCACG CCCTGAGAAC
AAAAGCAAAG TGGCCGGCAT TATGCTGGCG GCGGCGTTTG CCTCCTTCTT TACTGGTATC
ACTGAGCCGC TGGAATTCTC ATTCATGTTT GTGGCACCAG TGCTGTATTT CCTGCATGCG
CTGCTGACTG GTTTTTCCGT CTTTATCGCG GCCAGCATGC ATTGGATTGC CGGTTTTGGC
TTCAGTGCCG GTCTGGTGGA CATGGTGCTG TCATCGCGTA ATCCGTTAGC CACCCAGTGG
TACATGCTGC TTGTTCAGGG ACTGGTATTC TTCGTTATTT ACTATGTGGT GTTCCGCTTT
ACCATCACGC GCTTCAATCT GTTAACGCCG GGGCGTGAGC TGGCTGTGAG CGGTAGCGAA
GCTGATGGAT ATGACGTGAG TACAGCGTCT GAGAGCGAGA AATCAGGCGA TACTGCGGCG
TTAGCACGGG GCTATTTGCA GGCGCTGGGC GGAAAAACCA ACCTGATTGG CATTGATGCC
TGTATTACGC GTCTGCGTTT GAACGTGGCG GATTCCTCTC TGGTGGATGA TGCACAGGCG
AAGCGTCTTG GTGCGGCGGG CGTGATTCGT CTGAATAAGC AAAGCGTACA GATTGTCGTG
GGTACGCAGG CTGAATCGAT AGCGACCGCA CTGAAAGCGG AACGCGACAA AGTGTAA
 
Protein sequence
MSTLSYLQKV GRALMVPVAT LPAAAILMGI GYWIDPVGWG SENALAALLI KSGEAIIGHM 
AVLFAVGVAY GMSKDKDGAA ALTGFVGYLV LTTLCSPAVV AMIQRIPVEQ VPAAFGKIEN
QFIGILVGVM SAELYNRFSQ VELPKALSFF SGRRLVPILV SFLMILVAFI LMYVWPVIYN
ALVSFGEHIQ QLGSVGAGVY AFFNRLLIPV GLHHALNSVF WFDVAGINDI PNFLAGQQSI
DSGKAVVGIT GRYQAGFFPI MMFGLPGAAL AIYHCARPEN KSKVAGIMLA AAFASFFTGI
TEPLEFSFMF VAPVLYFLHA LLTGFSVFIA ASMHWIAGFG FSAGLVDMVL SSRNPLATQW
YMLLVQGLVF FVIYYVVFRF TITRFNLLTP GRELAVSGSE ADGYDVSTAS ESEKSGDTAA
LARGYLQALG GKTNLIGIDA CITRLRLNVA DSSLVDDAQA KRLGAAGVIR LNKQSVQIVV
GTQAESIATA LKAERDKV