Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1204 |
Symbol | |
ID | 8132139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1404890 |
End bp | 1406386 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864492 |
Product | PTS system, N-acetylglucosamine-specific IIBC subunit |
Protein accession | YP_003016788 |
Protein GI | 253687598 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.194888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTACTC TGAGCTATTT ACAAAAAGTC GGCCGGGCAC TGATGGTGCC TGTCGCGACG CTGCCTGCTG CCGCCATCCT GATGGGGATA GGTTACTGGA TTGATCCAGT TGGCTGGGGA AGCGAGAACG CATTAGCGGC ACTTCTCATC AAATCGGGCG AGGCGATTAT CGGGCATATG GCAGTGCTGT TTGCGGTCGG TGTCGCTTAC GGCATGTCGA AAGATAAGGA TGGTGCGGCA GCATTGACCG GCTTTGTCGG CTATCTGGTG CTGACCACGC TGTGTTCACC GGCCGTTGTC GCCATGATCC AACGGATCCC GGTTGAACAG GTGCCTGCGG CGTTTGGCAA GATTGAAAAC CAGTTCATCG GAATTCTGGT CGGTGTGATG TCCGCCGAAC TGTATAACCG CTTTAGTCAG GTTGAACTGC CTAAGGCGTT GTCGTTCTTC AGCGGACGCC GTTTGGTCCC AATTTTGGTT TCTTTCCTGA TGATCCTGGT GGCGTTCATT TTAATGTACG TCTGGCCGGT GATTTACAAT GCGCTGGTGT CGTTTGGCGA ACACATCCAA CAGCTGGGCT CGGTAGGTGC CGGGGTTTAT GCCTTCTTTA ACCGCTTGCT GATTCCTGTT GGGCTGCACC ACGCGCTGAA CTCCGTGTTC TGGTTTGATG TTGCGGGTAT CAACGATATC CCTAACTTCC TGGCTGGCCA GCAGTCTATT GATTCAGGCA AAGCCGTTGT GGGGATCACC GGACGTTATC AGGCGGGCTT CTTCCCGATT ATGATGTTCG GACTGCCGGG TGCGGCGCTG GCGATTTATC ACTGTGCACG CCCTGAGAAC AAAAGCAAAG TGGCCGGCAT TATGCTGGCG GCGGCGTTTG CCTCCTTCTT TACTGGTATC ACTGAGCCGC TGGAATTCTC ATTCATGTTT GTGGCACCAG TGCTGTATTT CCTGCATGCG CTGCTGACTG GTTTTTCCGT CTTTATCGCG GCCAGCATGC ATTGGATTGC CGGTTTTGGC TTCAGTGCCG GTCTGGTGGA CATGGTGCTG TCATCGCGTA ATCCGTTAGC CACCCAGTGG TACATGCTGC TTGTTCAGGG ACTGGTATTC TTCGTTATTT ACTATGTGGT GTTCCGCTTT ACCATCACGC GCTTCAATCT GTTAACGCCG GGGCGTGAGC TGGCTGTGAG CGGTAGCGAA GCTGATGGAT ATGACGTGAG TACAGCGTCT GAGAGCGAGA AATCAGGCGA TACTGCGGCG TTAGCACGGG GCTATTTGCA GGCGCTGGGC GGAAAAACCA ACCTGATTGG CATTGATGCC TGTATTACGC GTCTGCGTTT GAACGTGGCG GATTCCTCTC TGGTGGATGA TGCACAGGCG AAGCGTCTTG GTGCGGCGGG CGTGATTCGT CTGAATAAGC AAAGCGTACA GATTGTCGTG GGTACGCAGG CTGAATCGAT AGCGACCGCA CTGAAAGCGG AACGCGACAA AGTGTAA
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Protein sequence | MSTLSYLQKV GRALMVPVAT LPAAAILMGI GYWIDPVGWG SENALAALLI KSGEAIIGHM AVLFAVGVAY GMSKDKDGAA ALTGFVGYLV LTTLCSPAVV AMIQRIPVEQ VPAAFGKIEN QFIGILVGVM SAELYNRFSQ VELPKALSFF SGRRLVPILV SFLMILVAFI LMYVWPVIYN ALVSFGEHIQ QLGSVGAGVY AFFNRLLIPV GLHHALNSVF WFDVAGINDI PNFLAGQQSI DSGKAVVGIT GRYQAGFFPI MMFGLPGAAL AIYHCARPEN KSKVAGIMLA AAFASFFTGI TEPLEFSFMF VAPVLYFLHA LLTGFSVFIA ASMHWIAGFG FSAGLVDMVL SSRNPLATQW YMLLVQGLVF FVIYYVVFRF TITRFNLLTP GRELAVSGSE ADGYDVSTAS ESEKSGDTAA LARGYLQALG GKTNLIGIDA CITRLRLNVA DSSLVDDAQA KRLGAAGVIR LNKQSVQIVV GTQAESIATA LKAERDKV
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