| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1203 |
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| Symbol | nagB |
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| ID | 8132138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1403721 |
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| End bp | 1404521 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864491 |
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| Product | glucosamine-6-phosphate deaminase |
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| Protein accession | YP_003016787 |
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| Protein GI | 253687597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
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| TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.25247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTCA TTCCCTTAAC TACCGCAGCC GACGTCGGAA AATGGGCCGC CCGCCACATT
GTAGAGAAGA TTAACGCTTT CAAGCCTAGC GCAGAGCGCC CTTTTATTCT TGGGCTACCG
ACAGGCAGCT CACCGCTGGA GGCCTACAAA TCGCTGGTCG CTATGCATCA GGCGGGTCTG
GTGAGCTTCA AACACGTTGT CACCTTCAAT ATGGATGAAT ATGTCGGCCT GCCGACCGAT
CATCCGGAAA GCTATCATAC CTTCATGCAT CAGAATTTCT TCAATCACAT TGATATTCCG
CGTGAAAACA TTAACCTGTT GAACGGCAAC GCAGAAGACA CCACAGCAGA ATGTCGCCGC
TATGAAGAGA AAATAAAGTC CTACGGAAAA ATTCATCTTT TCATGGGTGG CGTGGGCAAT
GATGGACATA TCGCTTTCAA TGAGCCCGCC TCCTCTCTGG CTTCCCGCAC CCGCATCAAA
ACGTTGACGG AAGAAACCCG TATCGCCAAT TCCCGTTTCT TCGGCGGGGA CGTTAGTCTG
GTGCCTAAAT TTGCGTTGAC CGTGGGCGTC GGTACGTTGC TGGATGCCGA AGAAGTAATG
ATTCTGGTGA CCGGACGCAA CAAGGCGCTG GCACTTCAGG CTGCGGTAGA AGGCAACGTC
AACCATATGT GGACTATCAG TTGTCTGCAG CTTCATGCCA AGGCCATCAT GGTGTGTGAC
GAGCCTTCAA CGATGGAGCT GAAGGTAAAA ACTGTTAAAT ATTTCCGTGA GTTAGAAACG
GAAAGTATGA AGAACCTCTA A
|
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| Protein sequence | MRLIPLTTAA DVGKWAARHI VEKINAFKPS AERPFILGLP TGSSPLEAYK SLVAMHQAGL
VSFKHVVTFN MDEYVGLPTD HPESYHTFMH QNFFNHIDIP RENINLLNGN AEDTTAECRR
YEEKIKSYGK IHLFMGGVGN DGHIAFNEPA SSLASRTRIK TLTEETRIAN SRFFGGDVSL
VPKFALTVGV GTLLDAEEVM ILVTGRNKAL ALQAAVEGNV NHMWTISCLQ LHAKAIMVCD
EPSTMELKVK TVKYFRELET ESMKNL
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