Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1198 |
Symbol | ubiF |
ID | 8132127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1396561 |
End bp | 1397727 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644864480 |
Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
Protein accession | YP_003016782 |
Protein GI | 253687592 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0271465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTACG ATGCGATTGT GGTTGGCGGT GGCATGGTCG GCGCGGCCGC GGCGCTTGGG TTGGCACAGC AAGGGTTTCA GGTTGCGGTA GTTGAGCAGG AAATGCCAGC GCCGTTTGAT GCTGCCAGCC CGCCAGATTT AAGGATCTCG GCGATTGGCT ATGCGTCGGT TGCGCTGCTG AAAGAACTGG GCGCATGGCC ACGCGTACAG CAAATGCGCA GTGCGCCATA CCGCCGGCTG GAAACCTGGG AATGGGCGAA TGCCAGAGTC GTTTTCGATG CTGCTGACAT TCATCTACCT GAGCTGGGCT TCATGGTTGA AAACCGCGTG CTGCAATTGG CGCTCTGGGA AAGCTTACAG GAAGAAGAAC GTTGCCAATG TTACTGCCCG GCTACGCCGC AGAACCTGCA ACGCACCGAT GATGGCTGGT GCTTACAGCT TGCCGATGGG CAACAGCTGA CGGCTTCGCT GGTGATTGGC GCTGATGGCG CGAATTCTCA GGTTCGCCAG TGGGCGGGGA TTGGCATTAG CGGCTGGCAG TATCGTCAGT CTTGTATGCT GATTGGTGTT GAAACTTCGC AACCCCAACA GGATGTGACC TGGCAGCAGT TCACGCCGAG CGGCCCGCGT GCGTTTTTGC CGCTGTTTGA CCAGTGGGGA TCGCTGGTGT GGTACGACAG CCCACAGCGT ATTCGCCAGC TTCAGGCGAT GCCGCTCGCT CAGTTAGATA AAGAAATTGC AGCCGCCTTT CCTGAGCGAT TGGGCACGGT TAAAGCGCTC TCCGCCGGAT CATTCCCGCT GGTCAGGCGC CATGCGCAAA CCTATATCAA ACCGGGCTTG GTGCTACTGG GCGATGCGGC GCATACCATC AACCCGCTGG CAGGGCAGGG CGTTAATCTG GGATATCGCG ATGTCGAGGC GCTGTTGGAC GTGCTGATTA ATGCGCGTAA TGCAGGAGAA GCGTGGGACT CTGAGCGTGT GCTACGTCGC TATCAGTGTC GCCGTATGCC GGATAACCTG ATGATGCAAA GCGGGATGGA TCTCTTCTAT AACGCGTTCA GTAACGCGTT ACCGCCGCTG AGTTTTGCGC GTAATATGGC GCTGATGGTT GCACAGCGCG CTGGCGTGTT AAAACAGCGC GCGTTGAAGT ATGCCATTGG TGTCTGA
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Protein sequence | MHYDAIVVGG GMVGAAAALG LAQQGFQVAV VEQEMPAPFD AASPPDLRIS AIGYASVALL KELGAWPRVQ QMRSAPYRRL ETWEWANARV VFDAADIHLP ELGFMVENRV LQLALWESLQ EEERCQCYCP ATPQNLQRTD DGWCLQLADG QQLTASLVIG ADGANSQVRQ WAGIGISGWQ YRQSCMLIGV ETSQPQQDVT WQQFTPSGPR AFLPLFDQWG SLVWYDSPQR IRQLQAMPLA QLDKEIAAAF PERLGTVKAL SAGSFPLVRR HAQTYIKPGL VLLGDAAHTI NPLAGQGVNL GYRDVEALLD VLINARNAGE AWDSERVLRR YQCRRMPDNL MMQSGMDLFY NAFSNALPPL SFARNMALMV AQRAGVLKQR ALKYAIGV
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