| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1191 |
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| Symbol | |
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| ID | 8132120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1388128 |
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| End bp | 1388868 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864473 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003016775 |
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| Protein GI | 253687585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATAG ATTGGAACTG GGGCATATTT CTACAAGCCG CCCCTTTCGG CAACACAACC
TACCTCGGGT GGATTTTGTC CGGTCTGCAA GTTACCGTCA CATTGTCTAT CTGTGCCTGG
ATTATCGCCT TTCTCGTTGG TTCTTTATTT GGAATCTTGC GTACCGTCCC GAACCGCTTT
GTTGCGGGCA TTGGTACCTG CTACGTCGAG CTATTTCGCA ACGTCCCACT GATTGTCCAG
TTCTTTACCT GGTATCTGGT GGTGCCCGAA CTGCTTCCTG CCAGCATCGG CATGTGGTTT
AAAGCCGAGC TAGACCCGAA TATTCAGTTC TTCCTGTCAT CGATGATTTG TCTGGGGCTC
TTCACCGCAG CGCGCGTTTG TGAGCAGGTG CGTGCGGGGA TTCAATCGCT ACCGCGCGGG
CAGAAAGCTG CCGGATTGGC AATGGGCCTG ACGCTGCCAC AAACTTACCG CTATGTGTTG
CTGCCGAATG CATACCGCGT CATTGTTCCG CCATTGACGT CAGAGATGCT GAACCTGGTC
AAAAACTCGG CCATCGCGTC CACGATTGGT CTGGTTGATA TGGCGGCACA GGCAGGGAAA
CTGCTGGATT ATTCCGCCCA CGCGTATGAA TCCTTTACCG CCATCACGCT GGCGTACGTT
GGCATCAATG CCATCATTAT GTTGATTATG CAGATCGTTG AGCGAAAAAC CCGTTTGCCG
GGCAATATGG GGAGCAAATA A
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| Protein sequence | MSIDWNWGIF LQAAPFGNTT YLGWILSGLQ VTVTLSICAW IIAFLVGSLF GILRTVPNRF
VAGIGTCYVE LFRNVPLIVQ FFTWYLVVPE LLPASIGMWF KAELDPNIQF FLSSMICLGL
FTAARVCEQV RAGIQSLPRG QKAAGLAMGL TLPQTYRYVL LPNAYRVIVP PLTSEMLNLV
KNSAIASTIG LVDMAAQAGK LLDYSAHAYE SFTAITLAYV GINAIIMLIM QIVERKTRLP
GNMGSK
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