| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1190 |
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| Symbol | |
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| ID | 8132119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1387450 |
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| End bp | 1388124 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864472 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003016774 |
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| Protein GI | 253687584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGAAT TTGACTGGAG CTCAATTGGG CCAAGCATGC CGTACCTGAT TCAGGGGATG
GTTGTTACAC TCAAGATTAC GCTGACGGCG GTGGTATTCG GGATTGTGTG GGGCACTATT
CTGGCGGTAA TGCGCCTGTC GCCGATAAAA CCTATCAGTT GGTTCGCCAA ACTGTATGTG
AACCTGTTCC GCTCCGTTCC ACTTGTCATG GTGCTGCTGT GGTTCTATCT GGTGGTTCCT
AGCTTATTAC AAAATGTGCT TGGGCTATCG CCGAAAACCG ATATTCGCCT GATTTCAGCT
ATGGTAGCCT TCTCGCTGTT CGAGGCAGCC TATTATTCTG AAATTATTCG TGCGGGTATC
CTCAGCATAT CGCGCGGTCA ATCCTCCGCG GCACTGGCAT TAGGCATGAC GCATTGGCAA
TCCATGAAGC TGGTTATTCT GCCGCAGGCA TTCCGCGCCA TGGTGCCATT GTTGCTGACG
CAAGGGATTG TCCTGTTCCA GGATACCTCA CTGGTTTACG TGCTCAGCCT CGCTGATTTC
TTCCGTACCG CCTCAACTAT CGGCGAGCGT GACGGAACAC AAGTTGAAAT GATCCTGTTT
GCCGGGTTCA TTTATTTTAT CTTCAGCATT TCAGCCTCAA TGCTGGTCAG TTACCTGAAA
AAAAGGACGG TTTGA
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| Protein sequence | MYEFDWSSIG PSMPYLIQGM VVTLKITLTA VVFGIVWGTI LAVMRLSPIK PISWFAKLYV
NLFRSVPLVM VLLWFYLVVP SLLQNVLGLS PKTDIRLISA MVAFSLFEAA YYSEIIRAGI
LSISRGQSSA ALALGMTHWQ SMKLVILPQA FRAMVPLLLT QGIVLFQDTS LVYVLSLADF
FRTASTIGER DGTQVEMILF AGFIYFIFSI SASMLVSYLK KRTV
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