| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1184 |
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| Symbol | nadD |
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| ID | 8132113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1380899 |
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| End bp | 1381588 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864466 |
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| Product | nicotinic acid mononucleotide adenylyltransferase |
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| Protein accession | YP_003016768 |
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| Protein GI | 253687578 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.174285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGGCAAA GCATTACCGG AGGCATTCAT CTGAACCAGT CCCCCGCTAC ACCATCGCTA
ACCGCATTTT TTGGCGGCAC GTTCGACCCG ATTCATTACG GTCATCTCCA GCCGGTGACA
GCACTGGCAA ACCTCGTGGG GCTGACTCAG GTGGTTCTGC TGCCCAATAA TGTTCCGCCG
CATCGGCAGC AGCCTGAAGC CAGTTCCCAA CAGCGTTTTC ATATGGCTGA GCTGGCCGTT
GAAGGCAATC CGCTCTTTAC CGTGGACGAT CGTGAGCTGC AACGGCAAAC CCCCTCTTAC
ACCATTGAAA CATTGGAAGC ATTGAGGGCT GAAAAAGGCC GTAATGCGCC GTTGGGTTTT
ATTATCGGGC AGGATTCACT GCTGACGCTA CACCATTGGC ATCGCTGGCA GGATCTACTC
GGCGTCTGTC ATTTGCTGGT GTGCGCACGT CCCGGCTATC GCTCGACGCT GGAAACACCC
GAATTACAAC AGTGGCTGGA CGACCATCTG ACACACACGC CAGACGATCT CCACCGCCAA
GCGCAAGGGC GGATCTTTTT GGCAGACACG CCGCTGGTCA CCATCTCCGC CACGGAAATT
CGCCAACGTC GGCAGCAAGG TCTGGACTGC CACGATTTAT TACCTCCCGC CGTACTCAGT
TATATCGACG AAAACGGCCT GTACCAATAA
|
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| Protein sequence | MRQSITGGIH LNQSPATPSL TAFFGGTFDP IHYGHLQPVT ALANLVGLTQ VVLLPNNVPP
HRQQPEASSQ QRFHMAELAV EGNPLFTVDD RELQRQTPSY TIETLEALRA EKGRNAPLGF
IIGQDSLLTL HHWHRWQDLL GVCHLLVCAR PGYRSTLETP ELQQWLDDHL THTPDDLHRQ
AQGRIFLADT PLVTISATEI RQRRQQGLDC HDLLPPAVLS YIDENGLYQ
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