| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1180 |
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| Symbol | |
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| ID | 8132109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1376855 |
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| End bp | 1377967 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864462 |
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| Product | cell wall shape-determining protein |
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| Protein accession | YP_003016764 |
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| Protein GI | 253687574 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0230726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGATA GCCAACAAAA GGGATCGTTC TGGGCGAAAA TCCACATCGA CCTCCCGTTT
CTTCTCTGCA TCCTGGCACT GCTGGGCTAT AGCCTATTTG TCTTATGGAG CGCCAGCGGG
CAAGACGTCG GTATGATGGA ACGAAAAGTC GTTCAAATCG TACTAGGGTT TACGGTGATG
ATCGTGATGG CGCAAATCCC TCCCCGCGTG TATGAGGGCT GGGCTCCCTA CCTCTACGTA
TTCTGCGTAA TTTTGCTGCT CATCGTGGAT ATTTTCGGAC AGATTAGTAA AGGCGCGCAG
CGCTGGCTGG ATCTGGGCTT TATCCGTTTC CAACCGTCGG AAATTGCCAA GATCGCCGTA
CCGCTAATGG TCGCGCGTTT TATTAACCGT GATATGTGCC CGCCATCGCT AAAAAATACG
GCAATCGCAC TGGTGCTGAT TTTTGTCCCT ACGCTGCTGG TTGCCGCCCA GCCGGATTTA
GGCACCTCGA TTCTGGTCGC GCTCTCAGGG CTGTTTGTGC TTTTCCTCGC GGGTATGAGC
TGGCGCTTGA TTGGTATCGC CGTCCTGCTA CTCGCCGCTT TTATTCCTAT ACTCTGGTTT
TTCCTGATGC ATGATTATCA GCGCGCCAGG GTCATGATGC TACTCGATCC AGAAAGCGAC
CCGCTTGGTG CCGGATACCA TATTATTCAG TCGAAAATTG CGATAGGCTC GGGTGGCCTG
TCTGGAAAAG GTTGGCTGCA CGGCACACAG TCTCAGTTAG AGTTTCTGCC AGAACGCCAC
ACCGACTTTA TCTTTGCCGT ACTGTCAGAA GAGCTCGGCT TAATCGGCGT CTTGATTCTG
CTCGCCATGT ATCTGTTCAT GATCATGCGC GGTCTGGTCA TTGCTGCTAA TGCGCAAACC
TCGTTCGGCC GAGTGATGGT CGGCGGGCTG ATGCTGATTC TGTTTTTCTA TGTTTTCGTC
AATATCGGGA TGGTCAGCGG TATACTTCCC GTCGTTGGCG TGCCGCTGCC GCTAATCAGC
TATGGTGGCT CGGCGCTGGT CGTCTTAATG GCGGGGTTCG GTATCGTCAT GTCGATACAT
ACTCACCGCA AACTGCTATC CAAAAATTTA TAA
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| Protein sequence | MTDSQQKGSF WAKIHIDLPF LLCILALLGY SLFVLWSASG QDVGMMERKV VQIVLGFTVM
IVMAQIPPRV YEGWAPYLYV FCVILLLIVD IFGQISKGAQ RWLDLGFIRF QPSEIAKIAV
PLMVARFINR DMCPPSLKNT AIALVLIFVP TLLVAAQPDL GTSILVALSG LFVLFLAGMS
WRLIGIAVLL LAAFIPILWF FLMHDYQRAR VMMLLDPESD PLGAGYHIIQ SKIAIGSGGL
SGKGWLHGTQ SQLEFLPERH TDFIFAVLSE ELGLIGVLIL LAMYLFMIMR GLVIAANAQT
SFGRVMVGGL MLILFFYVFV NIGMVSGILP VVGVPLPLIS YGGSALVVLM AGFGIVMSIH
THRKLLSKNL
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