| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1176 |
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| Symbol | |
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| ID | 8132105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1373082 |
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| End bp | 1373765 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864458 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_003016760 |
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| Protein GI | 253687570 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000926852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACACT TGCTACAGGA TAAGATCATC GTACGCCAAT TTGACGTACA GCCGTATGAA
CCCGTCTCTC TGGCGATGCA TAATTTCACC GATCGACGCG ATGATAAAAC TCCAGATGAA
ATCTGGCTGG TGCAGCATCC CCGCGTATTC ACACAAGGTC AGGCGGGAAA AGCCGAACAT
GTCCTCATGC CCGGCGACAT TCCGGTCATT CAGAGCGACA GAGGTGGTCA GGTGACCTAC
CACGGCCCCG GCCAGCAGGT CATGTACGTG TTGATTGACC TGAAGCGCCG TAAGCTTGGC
GTTCGTCAGC TCGTCACCGC CATTGAAAAT ACCGTGATTG GCACACTGGC GCACTTCCAT
ATTGACGCCC ATGCTCGCCC TGATGCGCCC GGTGTTTATG TGGGTGAACG TAAAATTTGC
TCGCTGGGAC TGCGTATTCG CAAAGGCTGC TCTTTCCACG GGTTGGCGCT CAATATTGCT
ATGGATCTCT CCCCTTTCCT GCGTATCAAC CCGTGTGGTT ATGCCGGTAT GGAGATGACG
CAAATCAGCG ATCTGGTGCC GGGCGTCACG CTAGATGACA CCGCTCCCGT GCTGGTGAAC
ACCTTTTTGC TGTTAGTTGG CTATTCCGCG CCCGAGTTTA TTCCGTGGAA TCTGGACGTT
CAGGGTGAGC CGCTTCCTGG TTGA
|
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| Protein sequence | MTHLLQDKII VRQFDVQPYE PVSLAMHNFT DRRDDKTPDE IWLVQHPRVF TQGQAGKAEH
VLMPGDIPVI QSDRGGQVTY HGPGQQVMYV LIDLKRRKLG VRQLVTAIEN TVIGTLAHFH
IDAHARPDAP GVYVGERKIC SLGLRIRKGC SFHGLALNIA MDLSPFLRIN PCGYAGMEMT
QISDLVPGVT LDDTAPVLVN TFLLLVGYSA PEFIPWNLDV QGEPLPG
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