Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1172 |
Symbol | cspE |
ID | 8132101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1370476 |
End bp | 1370685 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644864454 |
Product | cold shock protein CspE |
Protein accession | YP_003016756 |
Protein GI | 253687566 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000586616 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAG TGTTAAGTGG TTTAATGAGT CCAAAGGCTT CGGTTTCATT ACTCCTGAAG ATGGTAGCAA AGACGTGTTC GTACACTTCT CTGCCATCCA GAGCAATGGT TTCAAAACTC TGGCTGAAGG TCAGCGTGTA GAGTTCGAAA TCACTGACGG TGCCAAAGGT CCTTCTGCTG CTAACGTTAA CGCTATTTAA
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Protein sequence | MSKIKGSVKW FNESKGFGFI TPEDGSKDVF VHFSAIQSNG FKTLAEGQRV EFEITDGAKG PSAANVNAI
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