| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1165 |
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| Symbol | |
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| ID | 8132094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1363948 |
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| End bp | 1365270 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864447 |
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| Product | citrate/H+ symporter, CitMHS family |
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| Protein accession | YP_003016749 |
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| Protein GI | 253687559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2851] H+/citrate symporter |
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| TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0312297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGCTC TCATCGGGGT GCTAACCATA GCCACCCTGC TCTTTTTCAT CATGACCAAA
CGAATGTCGC CTCTGGTGGC GCTTATCGTG ATACCCGTTC TTGGCGCGCT CGCGGCAGGC
AGCGGCACCG ATACCGCGAA ATACGTGGTG GACGGCATCA CCAAACTAGC CCCGATGGCG
GCGATGTTTG TGTTTGCCAT CGCCTTTTTC GGTGTCGTCA CCGATGCAGG CATGTTTGAT
CCTATCATCA AAGGGATCTT ACGCATGGTC GGCACCAGCC CGGTAAAAAT CATTATCGGC
ACAGGCGTAT TAGCACTGAT CGCGCACCTG GACGGTAACG GTGCCGTCAC CTTCCTAATC
ACCATTCCTG CGATGCTGCC GCTGTTTAAT AAGCTCGGCA TGGACAAGCG CATTTTGGTC
GGTATTACCG CGCTCAGTGC GGGTGTTAAC TTCCTGCCGT GGACCGGGCC GATGATCCGC
GCCGCCGCCG CGTTAAACAC CACCACACAC GACCTGTTTA TTCCGCTTAT CCCAGCACAA
ATTTGCGGTC TGACCTTCAT GGTGCTCATG GGTTATTACT GGGGCAAGAA AGAAGAGAAG
CGTCTGGGAT TAGCGTCAGG CAATCCACTG GCTGGCAGCT CGCCGTCCAT TGCGGCCGAA
GCGCATGTAA AAGAACTGAC CGATGCGGAA AAAGTATTAC GTCGTCCTAA GATGTTCTGG
GTCAACATCG CGCTGGTGCT TGCCGTTATC GGCACGATGG TGTTTACCAA AATTTCACCT
ACTGTCGCCT TCATGATCGC GCTGACGCTG GCACTGATGT TCAACTATCC CAACGTTGAA
ATGCAGAAAG AGCGCATTAA TGCCCATGCC AAAGCGGCGC TGATGATGGC CAGCATCCTG
TTTGCGGCGG GTGCGTTCAC CGGCATCATG AGCGGCACCG GTATGCTGAA AGCCATGTCG
CTCTCGGCGG TCAGCTTTGT GCCGGAATCT TTTGCCTCCC ACATTCCGTT TATCGTCGGT
CTGATCTCCA TGCCGCTGAG CCTGGTGTTT GACCCTGATT CGTACTACTT CGGCATCATG
CCAGTCATTG CCCACACCGT GGACATGCTG GGTGTACCAC CGATTCAGGT CGCGCAGGCT
TCCGTATTAG GACAGATGAC CACTGGCTTC CCGGTTAGCC CGCTAACGCC AGCCACCTTC
CTACTGGTCA GTCTGGCGGG TGTCGATCTC GCCGATCACC AGAAGTTCTC TATCCCTGTG
CTCTGGGCCG CCAGCGTCAT CATGACGTTC GCCTGCGTCA TCTTCGGGGT CTTCCCCTTA
TAG
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| Protein sequence | MLALIGVLTI ATLLFFIMTK RMSPLVALIV IPVLGALAAG SGTDTAKYVV DGITKLAPMA
AMFVFAIAFF GVVTDAGMFD PIIKGILRMV GTSPVKIIIG TGVLALIAHL DGNGAVTFLI
TIPAMLPLFN KLGMDKRILV GITALSAGVN FLPWTGPMIR AAAALNTTTH DLFIPLIPAQ
ICGLTFMVLM GYYWGKKEEK RLGLASGNPL AGSSPSIAAE AHVKELTDAE KVLRRPKMFW
VNIALVLAVI GTMVFTKISP TVAFMIALTL ALMFNYPNVE MQKERINAHA KAALMMASIL
FAAGAFTGIM SGTGMLKAMS LSAVSFVPES FASHIPFIVG LISMPLSLVF DPDSYYFGIM
PVIAHTVDML GVPPIQVAQA SVLGQMTTGF PVSPLTPATF LLVSLAGVDL ADHQKFSIPV
LWAASVIMTF ACVIFGVFPL
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