Gene PC1_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1164 
Symbol 
ID8132093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1362546 
End bp1363886 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content56% 
IMG OID644864446 
Producthypothetical protein 
Protein accessionYP_003016748 
Protein GI253687558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.301898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAA TTCGTATTGG TTCCGGCGCT GGCTATGCTG GCGATCGCAT CGAACCGGCC 
GTAGAACTGG CTCAAAAAGG CGACATTCAA TATCTGGTAT TTGAATGTCT GGCGGAACGC
ACTATCGCTA TCGGCCAAAA GCAGAAGCAG CAGAACCCGG AAAAGGGCTA CAACGAACTG
CTGGCTGACC GCATGCACGC CGTGCTGCCG CTCTGTCTGG AAAAAGGCAT CAAGATCATC
ACCAACATGG GCTCGGCTAA CCCTGTCGCA GCGGGTCAGC GCGTATTGGA AATCGCCAAA
GAGATTGGTG CAGACAAGCT GAAAATCGCC GTCGTGACTG GTGATGATGT GCACTCAGTG
CTGATTGCAC AGGATTCCAA GCTGGATGAG ATGGGTCAGC CGGTTTCACG CTGCGGCAAA
GACATTATTT CCGCCAATGC CTATCTGGGC GCGGATGCGC TGGTAGAGGC TCTGCGTCAG
GGTGCAGACG TGATTATTGC CGGACGCGTT TCCGACCCGT CGCTGTTCCT GTCCGCCATG
ATGTATGAAT TCAACTGGGC AGCCGATGAC TGGGATCATC TGGGCAAAGG TACCTGCCTC
GGTCACCTGT TGGAATGTGC AGGTCAAATC ACTGGCGGCT ACTACGCCGA TCCTGGTGTT
AAAGACATCC CTCATCTTGA TCGCTTGGGT TTCCCAATCG CGGAAATTAG CGAAGATGGC
AGCGCCGTGA TTACCAAAGT TGAAGGTTCC GGCGGCCGCG TCTGTGTGGA TACCTGCAAA
GAACAGCTGC TGTACGAAAT CCACCGCCCG GATAGCTATA TCACTCCAGA CGTGATTGCC
GATTTCAGCC ACGTCACGTT TACCCAAGAC GGTGAAAACC GCGTACGCGT ACAAGGTGCA
ACCGGACGCG CGAAAACCGA TACGCTGAAA GTCTCCGTCG GCTATCAGGA CGGGTTCATC
GGCGAAGGCG AAATTTCTTA CGCCGGTCCC GGTGCCGTCG CGCGAGGCCG TTTAGCGCTG
GATATCGTCA AAGGGCGCTT TGCGGTGTGC CAGATCGATT TTCAGGAAGT GCGCTATGAC
CTGATCGGTG TCGATGCCCT GCACGGTGCG CAGCGGTCGC AAAGCAGCGA ACCGTATGAA
GTGCGCGCGC GTGTCGCAGC ACGCTGCACC TCCAGAGCAC AGGCGGTCAA AGTGGGTAAC
GAAGTTGAAA CGCTCTATAC CAACGGCCCG GCAGGCGGCG GCGGCGTTAA CAAAGCGGTG
AAAGAAATAC TGGCGATGGA TTCTACCCTG CTGTCTCGCG CCTGCGTCAC ACCAGCCGTT
GATTATCTGG AGATTAAATA A
 
Protein sequence
MKTIRIGSGA GYAGDRIEPA VELAQKGDIQ YLVFECLAER TIAIGQKQKQ QNPEKGYNEL 
LADRMHAVLP LCLEKGIKII TNMGSANPVA AGQRVLEIAK EIGADKLKIA VVTGDDVHSV
LIAQDSKLDE MGQPVSRCGK DIISANAYLG ADALVEALRQ GADVIIAGRV SDPSLFLSAM
MYEFNWAADD WDHLGKGTCL GHLLECAGQI TGGYYADPGV KDIPHLDRLG FPIAEISEDG
SAVITKVEGS GGRVCVDTCK EQLLYEIHRP DSYITPDVIA DFSHVTFTQD GENRVRVQGA
TGRAKTDTLK VSVGYQDGFI GEGEISYAGP GAVARGRLAL DIVKGRFAVC QIDFQEVRYD
LIGVDALHGA QRSQSSEPYE VRARVAARCT SRAQAVKVGN EVETLYTNGP AGGGGVNKAV
KEILAMDSTL LSRACVTPAV DYLEIK