| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1162 |
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| Symbol | |
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| ID | 8132091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1361414 |
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| End bp | 1362070 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644864444 |
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| Product | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha |
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| Protein accession | YP_003016746 |
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| Protein GI | 253687556 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.893752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATA AAGTCATTGA TGCCAGCCAT TTCCGTTCTT ATTTATTTGA CGGAATGACA
ATTATGTTCG GTGGTTTTAT GGGCGTCGGA ACACCGCAAT TATTGGTAGA TGAGATCATT
AAATCCGGCG TCTCTGATTT AACCCTGATC GGAAATGATA CCGGTTTTGT CGATACCGGC
GTTGGACCGT TAATTGTCAG CGGTCAGGTA AAAAAACTGA TTACCTCACA TATTGGTACG
AACCCGGAAA CCGGACGCCG TATGCTCGCT GGTGAACTGG ACGTAGAGCT GGTGCCGCAA
GGAACGCTGG CAGAGCGTAT TCGCAGCGGC GGCGCAGGCT TAGGCGGCTT TCTGACGCCA
ACGGGCGTTG GCACCATTGT CGAAGAGAAT AAACAAAAAA TAACCATTAA CGACATTACC
TATTTATTAG AACTGCCCAT TAAGGCCGAT CTCGCCATAT TACAGGCCAG TATTGCCGAC
ACCAGCGGAA ACCTTATTTA CCATCTCACC GCCCGTAATT TTAACCCGCT CATTGCGCTC
GCCGCGAAGA AAGTCGTGGC GCAATGCGAG CAGGTTATTC CGGTCGGTCA ATTAGCACCG
GAATGTATTG TCACCCCAGC GGCGCTGGTC GATCACCTTT ATTTGGGAGA AAAATAA
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| Protein sequence | MNNKVIDASH FRSYLFDGMT IMFGGFMGVG TPQLLVDEII KSGVSDLTLI GNDTGFVDTG
VGPLIVSGQV KKLITSHIGT NPETGRRMLA GELDVELVPQ GTLAERIRSG GAGLGGFLTP
TGVGTIVEEN KQKITINDIT YLLELPIKAD LAILQASIAD TSGNLIYHLT ARNFNPLIAL
AAKKVVAQCE QVIPVGQLAP ECIVTPAALV DHLYLGEK
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