| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1161 |
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| Symbol | |
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| ID | 8132090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1360767 |
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| End bp | 1361414 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864443 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_003016745 |
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| Protein GI | 253687555 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGCGA AAGAATTAAT CGCCCGCCGC GTCGCACTGG AGCTGAAAAA CGGCGACGTG
GTGAATTTGG GTATTGGTTT ACCCACCAAA GTCGCGAATT ACGTACCAAA CGGCATTGAA
GTCACCTTCC AGTCGGAGAA CGGCTTTTTA GGGTTGGGGG CAATCACCGA ACCGGACAGC
AATCTGGTTA ATGCCGGTGG TCAGGCATGC GGCATGGTGC CTGGCGCAGC CATGTTCGAC
AGCGCGTTTT CCTTTGCGCT GATTCGCGGC GGCCATGTCG ATGTCTGCGT TCTGGGCGGC
TTGCAGGTGG ACGAGCACGG TAGCCTCGCC AACTGGATGG TGCCGGGGAA AATGGTGCCC
GGCATGGGCG GCGCGATGGA TCTGGTTGTC GGCGCGAAGA AGGTCATTAT CGCCCTGGAA
CACTGCGCCA AAAATGGCGA TGCGAAACTA TTGCACCAGT GCACCTACCC GCTGACCGCC
GCCAATAAAG TCAGCATGGT CGTCACAGAA CTGGCGGTCT TCCAGTTTAT CGACCAACAA
ATGGTGCTGA CCGAAATCAG CCCTGACATC ACCGTGGACG AACTGCGCCA AAAAACCGAG
GCGAACTTCA TCGTGTCCGC CGATTTAAAA CCTTTCAGCA TCCATTAA
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| Protein sequence | MDAKELIARR VALELKNGDV VNLGIGLPTK VANYVPNGIE VTFQSENGFL GLGAITEPDS
NLVNAGGQAC GMVPGAAMFD SAFSFALIRG GHVDVCVLGG LQVDEHGSLA NWMVPGKMVP
GMGGAMDLVV GAKKVIIALE HCAKNGDAKL LHQCTYPLTA ANKVSMVVTE LAVFQFIDQQ
MVLTEISPDI TVDELRQKTE ANFIVSADLK PFSIH
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