Gene PC1_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1160 
Symbol 
ID8132089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1359577 
End bp1360755 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content58% 
IMG OID644864442 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003016744 
Protein GI253687554 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACT CCGTTGTTAT TGTTAATGCC AAGCGCACCG CAATCGGTAA ATTCGCAGGC 
AGTCTGGCCA ACACATCCGC TATCGAGATG GCGTCAGCCA CCATTCGTGA CTGTCTGTCG 
ACGCTGCCGG ACACGCTGGC GATCGATGAA GTGATTCTCG GTAATGTGCT GCAAGCCGGT 
CTGGGTCAAA ACCCGGCACA TCAGGCAAGT CAGGCTGCCG GTCTCTCTTT TGAGACCCCC 
TCGCTGACCG TCAGCAAAGT CTGTGGCTCC GGCCTGAAGG CCGTCGTGCT CGGCGCACAG 
TCTATTCTGT CCGGCGATAA TCAGGTCTGC GTAACGGGCG GGATGGAAAA CATGAGCGCC 
GCGCCTTACC TGCTGGAAAA AGCGCGCCAC GGTTACCGCA TGGGGAATGG CAAGCTCGTT 
GATATCATGA TTAACGATGG CCTGTGGTGT GCGTTTAACG ATTACCACAT GGGCACCACA 
GCGGAAAACA TCGCCGAGCG CTACCAGCTT ACGCGTGAAG AACAAGATCG GGTGGCGCTG 
GCGTCCCAGC AGAAAGCCGT CGCCGCGATT GAGGCTGGCC GCTTCAAGGC GGAAATTACT 
CCACTGTCAC TGCGTAACAA GAAAGAGACG CGGATCTTCG ATCGGGACGA ATTCCCTCGT 
GCGGATACCA CGCTATCGTC GCTGGCAGCG CTACGTCCGG CATTCTCCGC GAACGGCACC 
GTCACCGCAG GCAATGCGTC CGGCATTAAC GATGCGGCCG CGACGCTGGT GTTAATGCGT 
GAATCCGAAG CGAAAAAACA GGGGATTACC CCGCTGGCGC GCATCCGCAG TTGGGCATCT 
GCCGGTGTAC CGAGTGAGGT CATGGGACTG GGACCAATTC CCGCGACGCA GAAAGCGCTA 
CTCAAAGCCG GGCTGACAAT CGGCGATATC GACCTGATTG AAGCCAACGA AGCCTTTGCC 
GCGCAGTTTC TAGCTGTACA GCGCGATCTC CAGCTCGATC CAGAAAAAGT GAACGTCAAC 
GGCGGCGCGA TTGCGCTGGG TCACCCTATC GGGGCAAGCG GCGCGCGCAT TCTTGTCACG 
TTGGTACACG CGCTGCACAG CTACAACAAA ACGCTGGGGC TGGCGACGCT GTGCATCGGC 
GGTGGGCAAG GTATCGCGAT GATCGTTGAG CGCATTTAA
 
Protein sequence
MNDSVVIVNA KRTAIGKFAG SLANTSAIEM ASATIRDCLS TLPDTLAIDE VILGNVLQAG 
LGQNPAHQAS QAAGLSFETP SLTVSKVCGS GLKAVVLGAQ SILSGDNQVC VTGGMENMSA 
APYLLEKARH GYRMGNGKLV DIMINDGLWC AFNDYHMGTT AENIAERYQL TREEQDRVAL 
ASQQKAVAAI EAGRFKAEIT PLSLRNKKET RIFDRDEFPR ADTTLSSLAA LRPAFSANGT 
VTAGNASGIN DAAATLVLMR ESEAKKQGIT PLARIRSWAS AGVPSEVMGL GPIPATQKAL 
LKAGLTIGDI DLIEANEAFA AQFLAVQRDL QLDPEKVNVN GGAIALGHPI GASGARILVT 
LVHALHSYNK TLGLATLCIG GGQGIAMIVE RI