Gene PC1_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1158 
Symbol 
ID8132087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1356716 
End bp1357333 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID644864440 
Productesterase YpfH 
Protein accessionYP_003016742 
Protein GI253687552 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.487845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCAAG ATTATGTTGT TGTTCAGCAG CCTTCGGCGG CGAATCGGTT AATCCTGTTG 
TTTCATGGCG TGGGCGATAC CGCCGCGGGC ATGGCTCAGA TTGGGCGCTA TTTTGCCGCT 
GCTTTGCCGC AGGCGATGGT GATCAGTATT GCAGGGCCGT TCGGCACTGG CTATGGCGAT 
GGTCGGCAGT GGTTCTCTGT GCAGGGGATC ACGGAAGAGA ATCGTTTATC TCGTATTGAA 
GCGAACCTGC CGCGCTTTGT GGATACCGTA CGCCACTGGC AGGAACAAAG CGGCATTAGC 
GCGGAACAAA CTGTGCTGGT GGGCTTTTCT CAGGGCAGCA TTATGTCGCT GGAGGCGTTG 
AAGTTAGCGT CCTCGCTGGC CGGGCACATT ATCGCGTTCA GCGGCCGCTT TGCCGTATTG 
CCAGAAAAAG CCTTTGCTGA TGTCGCAGTA CACCTGATTC ACGGTGAAGC GGACGGTGTG 
ATTGTGGTTG GACACGCTCA TGCTGCCGCT GAGCGTTTTC AGAAACTGGG GACCGCGTTT 
ACGTTGGATA TCGTGCCTGC TGTTGGGCAC GGCATTGATG AGCGGATGTT GAAACAGGCG 
TTGGCCTACC TCAAATAA
 
Protein sequence
MNQDYVVVQQ PSAANRLILL FHGVGDTAAG MAQIGRYFAA ALPQAMVISI AGPFGTGYGD 
GRQWFSVQGI TEENRLSRIE ANLPRFVDTV RHWQEQSGIS AEQTVLVGFS QGSIMSLEAL 
KLASSLAGHI IAFSGRFAVL PEKAFADVAV HLIHGEADGV IVVGHAHAAA ERFQKLGTAF 
TLDIVPAVGH GIDERMLKQA LAYLK