Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1155 |
Symbol | |
ID | 8132084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1352274 |
End bp | 1353035 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864437 |
Product | SMC domain protein |
Protein accession | YP_003016739 |
Protein GI | 253687549 |
COG category | [R] General function prediction only |
COG ID | [COG3910] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACAGA GTGACAAACC CTATCTGCAA CGTGTCTATT TTCATCCAAA GAAAATACGT GATCCCCTAC ATTATCCCTT TAGCATTCCG GCAATCAGCG ATCTCGAAAA GATCCATTTC CATCCTGATG TCACCTTTTT GGTCGGCGAG AACGGCTCTG GGAAATCGAC GTTGCTAGAA GCCGTGGCAA TCGCGATGGG GTTCAACCCG GAAGGCGGAT CGCGTAACTT CAATTTCAGC ACACGCGACT CCCATTCCAA CCTGAGCGAC TACATCCGCA TCGTCAAAGG CATAACGCGC CCACGCACCG GCTATTTTTT ACGGGCAGAA AGTTTTTTCA ATGTCGCGAC AGAAATAGAA AATATTGACC CTGGTCTGAT TCAACTGGCT TACGGTGGTG TTTCGCTCCA CCAGCAGTCG CACGGCGAAT CGTTTATGGC GCTGTTAAAC CATCGCTTTG GCCCCAACGG GTTTTATCTG CTGGACGAAC CGGAAGCCGC GCTGTCTCCA ACCCGACAGC TTGCAGCATT AGCGCGTATC CATCAGCTAG TGAATACGGG ATGTCAATTC ATCATTGCCA CCCACTCGCC TATTATTCTG GCTTACCCCA GCGCGGTGAT TTATCAGTTC GATGAAAGGG GTATTCAGCA GGTTGCCTGG CAGGAGACGG ATCACTATCA AATCACGCGG CAGTTTTTAA ATAACTCACA GGGTATGATG GATGTCTTAT TCGCCGATGA TGACATCGGC GAATCCTTTT AG
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Protein sequence | MEQSDKPYLQ RVYFHPKKIR DPLHYPFSIP AISDLEKIHF HPDVTFLVGE NGSGKSTLLE AVAIAMGFNP EGGSRNFNFS TRDSHSNLSD YIRIVKGITR PRTGYFLRAE SFFNVATEIE NIDPGLIQLA YGGVSLHQQS HGESFMALLN HRFGPNGFYL LDEPEAALSP TRQLAALARI HQLVNTGCQF IIATHSPIIL AYPSAVIYQF DERGIQQVAW QETDHYQITR QFLNNSQGMM DVLFADDDIG ESF
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