| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1153 |
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| Symbol | |
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| ID | 8132082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1348236 |
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| End bp | 1350038 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864435 |
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| Product | ABC transporter domain protein |
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| Protein accession | YP_003016737 |
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| Protein GI | 253687547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA GAGAGACAAG TACGGCAAGA CCGGGCATCA GTCAGATTCT GATGCCCTAT
TGGCAGACGC CAGAGAAATA TCTGGCGCTG CTTATTCTGG CGATGATTAT TAGCATCAAT
CTGGGTACGG CCTACATCAG CGTGGAAGCG AACCGGATAG CGGGGAAATT TACCGATGCG
CTGATTGGGC TGGATTGGGA GCAAATAAAA CCGCTATTTA TCTTCAGCTT TGTGCTCGGT
TTGGGAGCCA TGATGCTGAG GTGGGTAAAC GTACTGAGTC AAGGCTATCT GGCGCTGCGC
TGGCGTACCT GGATGACGCT CCATTATATT CGGCGGTGGA CGGGAACATC GGCTTATTAC
CAAATAGAAA GGGATGGTGC GCTGTCAAAT ATCGATCAGC GCATCGCTGA TGACGTTAAC
GAGCTGGTGT CGGCCTCGCT GAATTTTTTT CTCAGCATTA TCTCGGTCAT CATCAGCACC
GTCACGTACA CGACGCTGCT GTGGTCGGTG TCCGGGGTGC TGCGTTTTTC GTTTATGGGC
AGCGACTGGG CGATTCCTGG CTACATGGTC TATGCCCTTT ACATCGAGTA CGTGCTTCAG
GTCGCGCTGT CACACTGGCT CGGTAAGGCC CTGATCAGAT TGAATATGAA TCAGCAGAAC
GCGGAGGGAG ACTTCCGCTT TCTGGGCGTT CAGCTACGTG AAAACGCGGA ACAGATTGCC
TTCTATCAAG GCGGAGCGCG AGAAGGAGAG CGCCTTGCTC AGCGCTTTGC CCGCGTGCGT
GACAACGCGC TGTCTGTGCT GCTGCGCGGT TTCAAAGTGT CGTTTGGCCA GAGTCTGTTT
AGCCATTTTC TTTCGCCCTT ACCGACGCTG TTGGCTTTAC CGCTGTTATT AAGCGGTGAG
ATTACCTTTG GCGATATGAC ACGGATTCAG ATGGCCTACG GCTCTCTCGG TGCGACGCTG
AGTTATTTTA TGCAGGCGTA TCAGTCCTTC ACGCGCTGGC TGGCGCTGAC GAAGCGTTTG
CAGGATATGG AGGAAGCGCT GAATAAAAGC GAGCAGTCGC CATCGCCCAT TCGGATTACG
GATCATGATG GCTCTGATTT TTCCTGTCAG AACCTGCGGT TGTTTACGCC TGCGGGGCGG
GCGCTGACGG CGTTAGATAA CTGGCAGGTG TCGCCGGGCG AGCGCTGGAT GATTAACGGG
GCGTCCGGTG TAGGGAAGAG CACGCTACTG CGCGCCTGTG CCGGCCTGTG GCAGCACGGT
AGCGGGGCGA TTGCGCGGCC TCGCCGCTGT CGCACGCTGT TTTTACCGCA AAAAAGCTAC
CTTCCAACAG GCACGCTGAA AGCCGCGTTG TGTTACCCCG GTCAGGCGCG TGATTTTAGC
GATGAGGCGT GTCGGCAGGC GCTGATAGAC AGCGCATTAC CGAACATGGC CGAACAGCTG
AATGATGAAG ATCGCTGGCA GCAGCGGTTA TCCGGCGGTG AGCAGCAGCG AGTGGCAATA
GCCCGCACAT TGCTGCATCG TCCCGACTTT ATTTTTCTGG ATGAGGCCAC CAGTGCGCTC
GACCCTGAAA CGGAACAGCG GATTTATCAG GCGCTGATTA ACGGTTTGCC TAACAGCGCC
ATTATCAGCG TGGCACATCG GGAAACGCTG GCTGCTTTTC ATACTCATCA TTTACATCTG
ACACCGCTAA CCGGAAGTGA TAACCATCAT GATAGGGAAA ACCAGACTGG CGATGACGCG
CCACGGTATC AACGTACTGA TAGTGCTTTT AGCGAGCGTG GCCTTGCCTG GCGTGGCGAG
TGA
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| Protein sequence | MNARETSTAR PGISQILMPY WQTPEKYLAL LILAMIISIN LGTAYISVEA NRIAGKFTDA
LIGLDWEQIK PLFIFSFVLG LGAMMLRWVN VLSQGYLALR WRTWMTLHYI RRWTGTSAYY
QIERDGALSN IDQRIADDVN ELVSASLNFF LSIISVIIST VTYTTLLWSV SGVLRFSFMG
SDWAIPGYMV YALYIEYVLQ VALSHWLGKA LIRLNMNQQN AEGDFRFLGV QLRENAEQIA
FYQGGAREGE RLAQRFARVR DNALSVLLRG FKVSFGQSLF SHFLSPLPTL LALPLLLSGE
ITFGDMTRIQ MAYGSLGATL SYFMQAYQSF TRWLALTKRL QDMEEALNKS EQSPSPIRIT
DHDGSDFSCQ NLRLFTPAGR ALTALDNWQV SPGERWMING ASGVGKSTLL RACAGLWQHG
SGAIARPRRC RTLFLPQKSY LPTGTLKAAL CYPGQARDFS DEACRQALID SALPNMAEQL
NDEDRWQQRL SGGEQQRVAI ARTLLHRPDF IFLDEATSAL DPETEQRIYQ ALINGLPNSA
IISVAHRETL AAFHTHHLHL TPLTGSDNHH DRENQTGDDA PRYQRTDSAF SERGLAWRGE
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