Gene PC1_1130 details

Gene Information

• Locus tag: PC1_1130
• Symbol: upp
• ID: 8132059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1323799
• End bp: 1324425
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644864412
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_003016714
• Protein GI: 253687524
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG TCGAGGTGAA ACACCCGCTC GTCAAACACA AACTGGGTTT GATGCGAGAG 
AACGATATTA GTACGAAGCG TTTTCGTGAA CTGGCTTCCG AAGTGGGAAG TTTGCTGACT 
TACGAAGCGA CGGCTGACCT GGCAACCGAA AAAGTCACCA TTGATGGCTG GTGCGGTCCG 
GTTGAAGTCG ATCAGATCAA AGGCAAGAAA ATTACCGTCG TACCAATTCT CCGTGCAGGA 
TTAGGGATGA TGGAAGGCGT GCTGGAAAAT GTCCCTAGCG CGCGTATCAG CGTTGTCGGT 
ATCTACCGTG ATGAAGAGAC GCTAGAGCCT GTTCCTTATT TCCAAAAGCT GGTTTCCAAT 
ATCGAAGAGC GCATGGCGCT GGTGGTTGAC CCTATGTTGG CAACCGGCGG TTCAATGATT 
GCGACGATCG ATCTGCTGAA AAAAGCGGGT TGTCACAGCA TTAAGGTGCT GGTGTTGGTC 
GCGGCGCCAG AAGGGATTGC CGCACTGGAA AAAGCTCACC CGGATATCGA GCTTTACACG 
GCATCCATCG ATAAAGGCCT CAACGAGCAG GGTTACATCA TGCCGGGCCT GGGCGATGCG 
GGCGATAAAA TATTTGGTAC GAAATAA 

 

Protein sequence

MKIVEVKHPL VKHKLGLMRE NDISTKRFRE LASEVGSLLT YEATADLATE KVTIDGWCGP 
VEVDQIKGKK ITVVPILRAG LGMMEGVLEN VPSARISVVG IYRDEETLEP VPYFQKLVSN 
IEERMALVVD PMLATGGSMI ATIDLLKKAG CHSIKVLVLV AAPEGIAALE KAHPDIELYT 
ASIDKGLNEQ GYIMPGLGDA GDKIFGTK