| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1126 |
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| Symbol | |
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| ID | 8132055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1318267 |
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| End bp | 1320393 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864408 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003016710 |
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| Protein GI | 253687520 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.984983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT TTGCTATAAG AAAGACCACG TTCCGCCACG GCTGGCCGCT GCTGGCGCTG
TTGCCGTTTA GCATTCAGGC CGCCATCATT GATGGCAAAG AAGACACCAT GGTGGTGAGC
GCAAAACCTG GCGAGCAGAC GGGAAAAGAG ACAGGTTATC AGCCGCATAA AACCGTGACC
GGCACCCGTA CCGAAAGCCG CCTGCTGGAT GTGCCACAGG CCGTCAACGT CGTTCCGACT
CAGGTACTTG ACGATCGTGC GGTACGCAAC ATCGATGAAG CGCTGTATAA CGTCAGCGGT
ATCACGCAGT CGAATACGCT GGGCGGCACA CAGGATGCCA TAATCAAACG TGGCTTCGGC
GATAACCGCG ACGGTTCGAT TTTCCGCGAC GGCGTACGCT CCATTCAGGC ACGCAACTTT
ACGCCCAGCA GCGAGCGCGT CGAAGTGCTG AAAGGCCCAG CCTCCATGCT CTACGGCATG
GGCGAACCCG GCGGCGTGAT CAATATCATC AGCAAAAAGC CTGAACTGGT ACAGAAAACG
CACATTGAAG GCTGGGGAAG CAGCTTCAAG GGCGGTGGCG GTCAGTTGGA TGTCACCGGT
CCGTTAGGCA CGTCTGGTCT GGCTTACCGT ATGGTGGTCG ATCACGATGA AACTGATTAC
TGGCGCAACT TCGGGCGTAA CCGCCAGACG ACGGTTGCGC CATCTCTCAT GTGGTACGGC
GAAGACACCA CGGTACGTGT TTCCTACGAA CATATGGAAT ACCTGACACC TTTCGATCGC
GGCACCCTTA TCGATCCGAA GACGGGCAAG CCGGTTAATA CGCCGCGCGA TCGCCGCTTT
GATGAAAGCT ACAATGCGAC ACTCGGCGAT CAGGACAGCG TCACCATGCA GGTTGACCGC
AACCTGAATG ACCGCTGGAA AAGCAGCCTG ACCTATTCGT ATAACCGCAA TCGCTACAGC
GATAATCAGG CGCGTGCTAC AAAATACAAT GCCAATACGG GAGTCCTGAC ACGTCAGCCA
GACGCTACAG GCTATGCGCA TAGCCAGGCG CAAATTGTCC AGCTTACGCT GAATGGCGAC
GTTGACTGGG GTCGCATCAA TCACCAGTTG CTGTTTGGGT TTGACTATGA AGCGGATAGA
ACATTCCGTG GCGATATGAT CCGCGGTACA GCGGCTTCAG GATTCAACAT CTATAACCCG
GTGTACGGCC AGCAACCAGC CTCTACTGCC GTCAACGCGA AAGACAGTGA CCAGCGCGAG
AATATCGACA GCAAAGCTTT ATTTATGCAG GACGCTATCC GTCTTAACGA TCGCTGGCAG
TTGCTGGGTG GTTTGCGTTA TGACACGTTC GATGTGATGG CGGGTAAAGG ACGCCCTTTC
ATCACCAATA CGGACAGCTC ATACCACCGC GTCGTACCGC GTGCAGGCGT CATTTACAGC
CTGACGTCGT ATTCATCGCT ATATGCCAGC TACAGCGGTT CATTTAAGCC CAACAGCAAT
ATTGCCAATA ACATCGGTGC CCTTCCGCCC GAAATCGGCA AGTCTTACGA AATCGGTGCC
AAACTGGATC TGCCCAACCG TATTACCGGT AACGTAGCCT TGTTCGACAT TGAAAAACAA
AACGTAATGG TCAAGGTTGA TGACAATCTT TACCGTACAG CAGGGAAAGT GCGTTCGCAG
GGTGTTGAAC TGGATCTGGC AGGTAGCCTC ACCGATGCCT TAAGCTTGAT CGGTTCTTAT
GCCTATACCG ATGCTCGCGT CACCGCTGAC CCAGAAAACA CGGGTAAACG TATGCCGAAT
GCTGCACGTC ATACCGCCTC GCTGTTCCTG ACGCAGGACT TTGGCAATAT TGGCCTGGCC
GCCGGTGACG ATCTGCGCGC GGGTGCGGGT GCGCGCTACG TTAGCCGTCG CGCGGGCGAT
GCGGCAAATA CCTTCTATCT GGATGATTAC ACTGTCGCCG ATGCGTTTAT TGCCTATAGC
CTGCCGCTCA ACGGCTACAA GGTGAAATGG CAGTTGAACG TGAAGAATCT GTTCGACCAG
ACCTATTACC CCTCCAGCGG TAACAACCTG CGTGTCGCCA TCGGCGAGCC GCGTCAGGTG
GTGCTGCGCG CCAGCGTCGA TTTCTAA
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| Protein sequence | MNKFAIRKTT FRHGWPLLAL LPFSIQAAII DGKEDTMVVS AKPGEQTGKE TGYQPHKTVT
GTRTESRLLD VPQAVNVVPT QVLDDRAVRN IDEALYNVSG ITQSNTLGGT QDAIIKRGFG
DNRDGSIFRD GVRSIQARNF TPSSERVEVL KGPASMLYGM GEPGGVINII SKKPELVQKT
HIEGWGSSFK GGGGQLDVTG PLGTSGLAYR MVVDHDETDY WRNFGRNRQT TVAPSLMWYG
EDTTVRVSYE HMEYLTPFDR GTLIDPKTGK PVNTPRDRRF DESYNATLGD QDSVTMQVDR
NLNDRWKSSL TYSYNRNRYS DNQARATKYN ANTGVLTRQP DATGYAHSQA QIVQLTLNGD
VDWGRINHQL LFGFDYEADR TFRGDMIRGT AASGFNIYNP VYGQQPASTA VNAKDSDQRE
NIDSKALFMQ DAIRLNDRWQ LLGGLRYDTF DVMAGKGRPF ITNTDSSYHR VVPRAGVIYS
LTSYSSLYAS YSGSFKPNSN IANNIGALPP EIGKSYEIGA KLDLPNRITG NVALFDIEKQ
NVMVKVDDNL YRTAGKVRSQ GVELDLAGSL TDALSLIGSY AYTDARVTAD PENTGKRMPN
AARHTASLFL TQDFGNIGLA AGDDLRAGAG ARYVSRRAGD AANTFYLDDY TVADAFIAYS
LPLNGYKVKW QLNVKNLFDQ TYYPSSGNNL RVAIGEPRQV VLRASVDF
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