| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1110 |
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| Symbol | |
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| ID | 8132039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1300001 |
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| End bp | 1301329 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864392 |
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| Product | isochorismate synthase |
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| Protein accession | YP_003016694 |
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| Protein GI | 253687504 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0109338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGTGA AACAACTTTC CGACTTGCTG CGGCATTTGC AGCAGGATTT GCGCGAGCCA
CAGCCTGAAC GCGCAGGTTT CAGACAAATA ACGCGTTCAT TAACCCTCAG CGATACGTCT
GAGCTATTGC CGTGGCTGGC GACTCAGCCA GTGTACCCGC AGTTCTATTG GCAACATCGT
CAGGATCGTG AAGAAGCCGC CGTTTGCGGC AACGTGTGTG GGTTTCGTCA TCTTCAGGAT
GCAGAAGCAT TTCTTGCTCA GCAGCAGTGC GATCCCAACG TGCGTATCTG GGGGCTGAAT
GCGTTTAACC AGATAAAAGA AAGCGGCACG TCTTCACCTG GCTACCTGTT TTTGCCCCGG
GCAGAATTGC GGCGTCAGGA TGATACGCTC AGTCTGAGCA TTAATCTGTT CAGCGATACC
TCATTGCAAC AGGATGCCGC CGAAGCTTCG GCGTTTCTTA ATCTGCTTCT GCCGCCTGCG
CCGTCGCCTC TTTTGCATGC GGAGGTGCAG TCCGTCGGGC ATCAGCCGGA GCGTCAGGGA
TGGATTGATT TGCTCCAGCG GGCGCTGCAC GACATCAAAG CAGGGCTGAT GGAAAAGGTC
GTTCTGGCGC GCACGACGAC GCTAACGCTG ACGCAGCCGC TACAGGCGAC CACCTTTATG
GCCGCCAGCC GGGCGGCAAA TCACCACTGC TTCCATTTCA TGCTGGCGCA CGACGCGCGT
CATGCGTTTC TCGGTTCCAG CCCGGAGCGG CTTTATCGCC GTCGGGGGAG CGAACTGGAA
ACGGAAGCGC TGGCGGGAAC GGTGGCAAGC GATCGCGATG CGCACAAAGC CGCTGAACTG
GGCGACTGGC TAATGAATGA CACCAAAAAT CAGTGTGAGA ACATGCTGGT GGTGGATGAT
ATTTGCCAGC GGCTACAGCA GTCGGCGCTG TCGCTGGATG TGATGCCGCC GGAAATTGTG
CGCCTGCGTA AAGTGCAGCA CCTGCGCCGT ACCATTCACG CCACATTGCG AACCGCGTCC
GATAGCGCGT GCCTGAATGC ATTACAGCCC ACGGCGGCGG TGGCGGGTTT GCCGAGGCAA
GAGGCGCGCC GTTTTATTGC CGAATATGAA CCGTTTGAAC GCGGCTGGTA CGCAGGGTCG
GCGGGTTACC TGTCTCGTCA GCAGTCTGAA TTCAGCGTGG CGTTACGTTC GGCCGAAGTG
CGGGATCATA TTTTGACGCT CTATGCCGGT GCCGGAATTG TGGCCGGTTC TGATCCAGAA
CAAGAATGGC AGGAGTTGGA AAACAAAGCC GCAGGGCTGA GATCCCTGTT AGACGGTGAT
ATGTCATAG
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| Protein sequence | MTVKQLSDLL RHLQQDLREP QPERAGFRQI TRSLTLSDTS ELLPWLATQP VYPQFYWQHR
QDREEAAVCG NVCGFRHLQD AEAFLAQQQC DPNVRIWGLN AFNQIKESGT SSPGYLFLPR
AELRRQDDTL SLSINLFSDT SLQQDAAEAS AFLNLLLPPA PSPLLHAEVQ SVGHQPERQG
WIDLLQRALH DIKAGLMEKV VLARTTTLTL TQPLQATTFM AASRAANHHC FHFMLAHDAR
HAFLGSSPER LYRRRGSELE TEALAGTVAS DRDAHKAAEL GDWLMNDTKN QCENMLVVDD
ICQRLQQSAL SLDVMPPEIV RLRKVQHLRR TIHATLRTAS DSACLNALQP TAAVAGLPRQ
EARRFIAEYE PFERGWYAGS AGYLSRQQSE FSVALRSAEV RDHILTLYAG AGIVAGSDPE
QEWQELENKA AGLRSLLDGD MS
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