| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1108 |
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| Symbol | |
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| ID | 8132037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1295675 |
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| End bp | 1298362 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644864390 |
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| Product | phosphotransfer intermediate protein in two-component regulatory system with RcsBC |
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| Protein accession | YP_003016692 |
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| Protein GI | 253687502 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCCA TGATTCTGCG TTATTTTTCT CTCCTTACGG TGTTATCGAT CCTGATTACC
GGAACGTTCA GCTATAGCTA CATCAACGAC TTGCTGGCGG ACAAAAAACA CTCTCTGACA
ACCATTGCCC AGGGCATACA AAAACGTGTC GATACCTACC GTTTTTTCAC CTACCAAATA
TACGGCAGCC TGAACAGCGA ACCGTCCCCG AGCGATGCCA ACATTACCGC CATTAATTTA
ATGCCCAATG TTTTCTACGT AGAAAAAAAT GGTCAGAAAA CGGACGCGCT GATTTTTGGG
CAACACGATA AAGGCACGCT GACGTCGGTT CGTCGGATAT CACGCTATCT GGATATTCTC
TGGGGAGCGG AGAACAGCGT CTATTCCATG TATTACCTGA ATGGTATCGA CAATAGCCTG
ACGATGATTT CTACGCAGAC CCTGAAAGAT ATCTCTTCGC AGTTCCGCGG CAATTATATT
ACGGTCATCG CCGAAGCCCG CCGGACAGAA ATGCTGCAAC AGGCGAATGT GTTAGACGAG
CGTGAAAGTT TTTCCCCGCT GCGTAAATTA CGCTTCTATA ACGACTACTA TTTTACGCTG
CGCACCACAT TCAATCAGCC AGGCCATCTG GCGACAATTC TTGCCTTCGA CCTGCCGATT
AATGATTTAA TCCCAGACAC GATTCCGCGT GAGCACCTTA TGCTGAAGCC GGATACGCCC
GCGGCCAGCA ATATGGACAG CAGCAGTAAT GGCGAAGGTT CGGCTGACGT GCAGCTTCAT
GGCTCCAATA TTGAAATCTC CGCTACGCTC GTTAATGCAC CGCTGAAAAT CGTTTTTCAG
GTTCCCGTAA AAACTCTGAT TATTGATTCA TTGCGTAATA ACGTCTGGCT TCTGCTGCTG
AATCTGGTTC TACTGATTTT ATCCCTCGCT GGCTTTTATC TTTTCCGTCG GAAGTATGCA
CATCCCGTAG AGGATTTATC GCATCAGTTG GAAAAGAAGC TGGATATTTA CCGTGAAACC
ACGAGCAGAA TTCCGATGGG CGTGCTGGTT TATGACTTCA GCAGCAATAA AATCATCATA
CAAAATGAGC GTGCCGAGCA TTTACTTCCG CACCTGAGCC TGCAAAAAAT CACCAATATG
GCGGACGAAC ATCAGGGCGT TATTCAGGTC ACGATCAATA ATGAAATGTA TGAAATCCGC
CAAATTCGTA GCCAATATTC GCCTGATTAT TGCCTCTTCC TGCTGCGTGA ACAGGATAAA
GAGATTCTGG TACAGCGGAA GTTGCTGCTG GCTCAGCGTG AATATGAAAA GAATATTCAT
GCCAGAAAAC GCTTATTCCA AAACCTGCTC AGCGAATTCA AACAGCCACT GATTTCACTG
CAACAGCATA TTCATACGCT GCGCCACAGC GGTACGGAAA TGGTACAGAC ACCAACACTA
GATCAGCTAA CAGCAGATAC TCGTTGTGCT ATCGAACTGC TGGAAAATAT CGCCTTGCAC
GAAAAGCTCG AAGCGCAGGA ATGGACCGTG GTTAACAACA GCTTTTCGCT GCTGGCGCTA
ATGGACAATG TTCTTCTTGA GCTACTACCG CGATTGAACC AAAAAGGTCT GGCCCTGTTT
CATCATTACA ACCTGGATAG TAATCAAACT TACGTGGGTG ATGCCGAGCT GTTGAAAAAG
ACGCTGGCGC TGCTGCTGAA TTATTCAGTG ACCAATACGG ATTACGGCAA GATTACCGTG
TCGGTTGACA GAAAAAATAA CGAGTCGGAT ACGTTGATTA TTCAGGTCAG CGATACGGGA
ACACATGTTT CAGGTAAAGA GCAGGAAAAT ATCCGTCATC CTTTCCTGCA CCCCGCCACT
TCCGACCGTT TCGGACAAAA TTCAGGATTG ACCTTATTTT TGTGTAATCA ACTCTGTAAT
AAACTGGGCG GTGCGTTAAC CATCAACAGT AAGTCCGGGT TAGGTACACA CTATATTCTG
ACGCTAAAAC TGGAGCCGGA AGCGCTTCCC GTTGAGGAAG AAAAACTGCT GGATGGTATT
ACCATTCTGC TGGATGTGAC ATCTGATGAA GTACAGCATA TTGTCGGCAA TATGCTGACG
GGCTGGGGAG CAAATTATCT GGTTAGCGAT GAACGCCAGA TTAATCAGGA AGCAGATATC
TGCATTACTG ACGACCCGGA GAACAAGACA GATTATACGC TGCTGTTGAG TCACGACGAT
GACACATTAA CGCCTTTGGG CCCGCGCCGT TTGCGGGTGA ATTATAATAT CAGCCACCTC
CTGCTGGAGG CACTACTGAA GCTGATTGAG CTACAACTGG AAACATCACC CGATGCGCTA
CAGGAAGGGG AACAGGATGA TGTCGAGTTT TACGCCGCAC AATTGGCATC AAGCGACTAT
TATTCGCTGT TCGTGGAGAC AGTACCGGAT GATTTAAAGA GGCTGTATAC TGAAGCGGAA
GCAGGCGATT TTCCGTCACT TTCGCAGACG GCACACCGGC TGAAAGGCGT GTTTGCCATG
CTGAATCTGC ATCCTGGCAA ACTGTTGTGT GAACAGCTTG AACAGCATAT TACCGCGCAT
GATAGTGAAG AGATCGACGC AAACCTTCAT AAGATTGAAA GGTTTGTCAG TGCACTACTA
TCCCCAGAAG AACCTAAAGG GCAGCAAGGT AGCCAACAAG ATGAGTAA
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| Protein sequence | MPAMILRYFS LLTVLSILIT GTFSYSYIND LLADKKHSLT TIAQGIQKRV DTYRFFTYQI
YGSLNSEPSP SDANITAINL MPNVFYVEKN GQKTDALIFG QHDKGTLTSV RRISRYLDIL
WGAENSVYSM YYLNGIDNSL TMISTQTLKD ISSQFRGNYI TVIAEARRTE MLQQANVLDE
RESFSPLRKL RFYNDYYFTL RTTFNQPGHL ATILAFDLPI NDLIPDTIPR EHLMLKPDTP
AASNMDSSSN GEGSADVQLH GSNIEISATL VNAPLKIVFQ VPVKTLIIDS LRNNVWLLLL
NLVLLILSLA GFYLFRRKYA HPVEDLSHQL EKKLDIYRET TSRIPMGVLV YDFSSNKIII
QNERAEHLLP HLSLQKITNM ADEHQGVIQV TINNEMYEIR QIRSQYSPDY CLFLLREQDK
EILVQRKLLL AQREYEKNIH ARKRLFQNLL SEFKQPLISL QQHIHTLRHS GTEMVQTPTL
DQLTADTRCA IELLENIALH EKLEAQEWTV VNNSFSLLAL MDNVLLELLP RLNQKGLALF
HHYNLDSNQT YVGDAELLKK TLALLLNYSV TNTDYGKITV SVDRKNNESD TLIIQVSDTG
THVSGKEQEN IRHPFLHPAT SDRFGQNSGL TLFLCNQLCN KLGGALTINS KSGLGTHYIL
TLKLEPEALP VEEEKLLDGI TILLDVTSDE VQHIVGNMLT GWGANYLVSD ERQINQEADI
CITDDPENKT DYTLLLSHDD DTLTPLGPRR LRVNYNISHL LLEALLKLIE LQLETSPDAL
QEGEQDDVEF YAAQLASSDY YSLFVETVPD DLKRLYTEAE AGDFPSLSQT AHRLKGVFAM
LNLHPGKLLC EQLEQHITAH DSEEIDANLH KIERFVSALL SPEEPKGQQG SQQDE
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