Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1102 |
Symbol | nrdB |
ID | 8132031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1284482 |
End bp | 1285612 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864384 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_003016686 |
Protein GI | 253687496 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTATA CCACTTTTTC ACAGAATAAA AATGACCAGT TGCTAGAACC GATGTTCTTC GGTCAGTCCG TTAACGTTGC CCGTTTCGAT CAGCAAAAAT ATGAAATTTT CGAAAAACTG ATCGAAAAAC AGCTGTCCTT CTTCTGGCGT CCGGAAGAAG TCGACGTGTC CCGCGACCGC ATCGACTATC AGGCTCTGCC CGATCACGAA AAACACATCT TCATCAGCAA CCTGAAATAT CAAACGCTGC TGGATTCGAT TCAGGGTCGT AGCCCAAACG TGGCGCTGCT GCCGCTGATT TCTATCCCTG AGCTGGAAAC CTGGGTAGAA ACCTGGGCTT TCTCGGAAAC CATTCACTCA CGCTCTTACA CGCATATCAT TCGTAATATC GTGAACGATC CGTCGTTGGT GTTTGACGAT ATCGTGACGA ACGAAGAGAT TCTAAAGCGT GCCAAAGATA TCTCTGGCTA CTACGACTCG CTGATCGAGA TGACCGGCTA CTATCATCTG CTGGGTGAAG GGACACATCA GGTCAACGGC AAAAGCGTGA CCGTAGATCT GCACTCGCTG AAGAAACAAC TGTATATTTG CCTGATGAGC GTAAATGCGC TGGAAGCGAT TCGCTTCTAC GTCAGCTTTG CCTGCTCGTT TGCTTTTGCA GAACGTGAAC TGATGGAAGG CAACGCCAAA ATCATCAAGC TGATAGCCCG TGATGAAGCA CTGCATCTGA CCGGCACACA GCACATGCTG AACCTGATGC GCTCTGGTCA TGACGACCCT GAAATGGCGC AGATTGCCGA AGAGTGTCAG CAGGAGTGTT ATGACCTGTT CGTGCTCGCC GCTCAGCAAG AAAAAGAGTG GGCGGAATAC CTGTTCCGCG ACGGCTCGAT GATTGGTCTG AACAAAGATA TTCTGTGCCA GTACGTGGAA TACATCACCA ACATCCGTAT GCAGGCGGTT GGCCTACCGC TACCGTTCCA GACGCGTACC AACCCCATTC CGTGGATCAA CGCCTGGCTG GTATCCGATA ACGTGCAGGT CGCGCCACAG GAAGTGGAAG TCAGCTCCTA TCTGGTTGGT CAGATCGATT CAGAGATCAG CGACGACGAC CTGAGCGATT TCCAACTGTA A
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Protein sequence | MAYTTFSQNK NDQLLEPMFF GQSVNVARFD QQKYEIFEKL IEKQLSFFWR PEEVDVSRDR IDYQALPDHE KHIFISNLKY QTLLDSIQGR SPNVALLPLI SIPELETWVE TWAFSETIHS RSYTHIIRNI VNDPSLVFDD IVTNEEILKR AKDISGYYDS LIEMTGYYHL LGEGTHQVNG KSVTVDLHSL KKQLYICLMS VNALEAIRFY VSFACSFAFA ERELMEGNAK IIKLIARDEA LHLTGTQHML NLMRSGHDDP EMAQIAEECQ QECYDLFVLA AQQEKEWAEY LFRDGSMIGL NKDILCQYVE YITNIRMQAV GLPLPFQTRT NPIPWINAWL VSDNVQVAPQ EVEVSSYLVG QIDSEISDDD LSDFQL
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